Team:Freiburg/3D-Modeling

{{Freiburg2008_Main| Content= _3D-modeling

DNA-Origami
Planning the input pattern on the DNA-Origami surface, we generated various 3D-models of the huge molecule using NanoEngineer, Pymol and SwissPdbViewer (both freeware). Some of those models are shown here to give you an impression of the molecules we have engineered this year.

Fusion Proteins
The pictures below show models of the fusion proteins of our composite parts Bba_K157032 and Bba_K157033 code for (generated with "SwissPdbViewer"): Fig.6: Red: LipocalinFluA, Grey: "Transmembrane region (BCR, no structural data; symbolized by helix), Blue: left: Split-Cerulean (CFP), N-terminal fragment; right: Split-Cerulean (CFP), C-terminal fragment Following pdb-files have been used to generate the models: Cerulean-CFP: 2Q57 Venus-YFP: 1MYW Engineered Lipocalin: 1n0s B1-8 Fv-Fragment:1a6w }}