Team:Edinburgh/Modeling
From 2008.igem.org
(Difference between revisions)
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+ | <html> | ||
+ | <head> | ||
+ | <title>Edinburgh iGem 2008</title> | ||
+ | <script type="text/javascript"> | ||
+ | //Drop Down Tabs Menu- Author: Dynamic Drive (http://www.dynamicdrive.com) | ||
+ | //Created: May 16th, 07' | ||
+ | |||
+ | var tabdropdown={ | ||
+ | disappeardelay: 200, //set delay in miliseconds before menu disappears onmouseout | ||
+ | disablemenuclick: false, //when user clicks on a menu item with a drop down menu, disable menu item's link? | ||
+ | enableiframeshim: 1, //1 or 0, for true or false | ||
+ | |||
+ | //No need to edit beyond here//////////////////////// | ||
+ | dropmenuobj: null, ie: document.all, firefox: document.getElementById&&!document.all, previousmenuitem:null, | ||
+ | currentpageurl: window.location.href.replace("http://"+window.location.hostname, "").replace(/^\//, ""), //get current page url (minus hostname, ie: http://www.dynamicdrive.com/) | ||
+ | |||
+ | getposOffset:function(what, offsettype){ | ||
+ | var totaloffset=(offsettype=="left")? what.offsetLeft : what.offsetTop; | ||
+ | var parentEl=what.offsetParent; | ||
+ | while (parentEl!=null){ | ||
+ | totaloffset=(offsettype=="left")? totaloffset+parentEl.offsetLeft : totaloffset+parentEl.offsetTop; | ||
+ | parentEl=parentEl.offsetParent; | ||
+ | } | ||
+ | return totaloffset; | ||
+ | }, | ||
+ | |||
+ | showhide:function(obj, e, obj2){ //obj refers to drop down menu, obj2 refers to tab menu item mouse is currently over | ||
+ | if (this.ie || this.firefox) | ||
+ | this.dropmenuobj.style.left=this.dropmenuobj.style.top="-500px" | ||
+ | if (e.type=="click" && obj.visibility==hidden || e.type=="mouseover"){ | ||
+ | if (obj2.parentNode.className.indexOf("default")==-1) //if tab isn't a default selected one | ||
+ | obj2.parentNode.className="selected" | ||
+ | obj.visibility="visible" | ||
+ | } | ||
+ | else if (e.type=="click") | ||
+ | obj.visibility="hidden" | ||
+ | }, | ||
+ | |||
+ | iecompattest:function(){ | ||
+ | return (document.compatMode && document.compatMode!="BackCompat")? document.documentElement : document.body | ||
+ | }, | ||
+ | |||
+ | clearbrowseredge:function(obj, whichedge){ | ||
+ | var edgeoffset=0 | ||
+ | if (whichedge=="rightedge"){ | ||
+ | var windowedge=this.ie && !window.opera? this.standardbody.scrollLeft+this.standardbody.clientWidth-15 : window.pageXOffset+window.innerWidth-15 | ||
+ | this.dropmenuobj.contentmeasure=this.dropmenuobj.offsetWidth | ||
+ | if (windowedge-this.dropmenuobj.x < this.dropmenuobj.contentmeasure) //move menu to the left? | ||
+ | edgeoffset=this.dropmenuobj.contentmeasure-obj.offsetWidth | ||
+ | } | ||
+ | else{ | ||
+ | var topedge=this.ie && !window.opera? this.standardbody.scrollTop : window.pageYOffset | ||
+ | var windowedge=this.ie && !window.opera? this.standardbody.scrollTop+this.standardbody.clientHeight-15 : window.pageYOffset+window.innerHeight-18 | ||
+ | this.dropmenuobj.contentmeasure=this.dropmenuobj.offsetHeight | ||
+ | if (windowedge-this.dropmenuobj.y < this.dropmenuobj.contentmeasure){ //move up? | ||
+ | edgeoffset=this.dropmenuobj.contentmeasure+obj.offsetHeight | ||
+ | if ((this.dropmenuobj.y-topedge)<this.dropmenuobj.contentmeasure) //up no good either? | ||
+ | edgeoffset=this.dropmenuobj.y+obj.offsetHeight-topedge | ||
+ | } | ||
+ | this.dropmenuobj.firstlink.style.borderTopWidth=(edgeoffset==0)? 0 : "1px" //Add 1px top border to menu if dropping up | ||
+ | } | ||
+ | return edgeoffset | ||
+ | }, | ||
+ | |||
+ | dropit:function(obj, e, dropmenuID){ | ||
+ | if (this.dropmenuobj!=null){ //hide previous menu | ||
+ | this.dropmenuobj.style.visibility="hidden" //hide menu | ||
+ | if (this.previousmenuitem!=null && this.previousmenuitem!=obj){ | ||
+ | if (this.previousmenuitem.parentNode.className.indexOf("default")==-1) //If the tab isn't a default selected one | ||
+ | this.previousmenuitem.parentNode.className="" | ||
+ | } | ||
+ | } | ||
+ | this.clearhidemenu() | ||
+ | if (this.ie||this.firefox){ | ||
+ | obj.onmouseout=function(){tabdropdown.delayhidemenu(obj)} | ||
+ | obj.onclick=function(){return !tabdropdown.disablemenuclick} //disable main menu item link onclick? | ||
+ | this.dropmenuobj=document.getElementById(dropmenuID) | ||
+ | this.dropmenuobj.onmouseover=function(){tabdropdown.clearhidemenu()} | ||
+ | this.dropmenuobj.onmouseout=function(e){tabdropdown.dynamichide(e, obj)} | ||
+ | this.dropmenuobj.onclick=function(){tabdropdown.delayhidemenu(obj)} | ||
+ | this.showhide(this.dropmenuobj.style, e, obj) | ||
+ | this.dropmenuobj.x=this.getposOffset(obj, "left") | ||
+ | this.dropmenuobj.y=this.getposOffset(obj, "top") | ||
+ | this.dropmenuobj.style.left=this.dropmenuobj.x-this.clearbrowseredge(obj, "rightedge")+"px" | ||
+ | this.dropmenuobj.style.top=this.dropmenuobj.y-this.clearbrowseredge(obj, "bottomedge")+obj.offsetHeight+1+"px" | ||
+ | this.previousmenuitem=obj //remember main menu item mouse moved out from (and into current menu item) | ||
+ | this.positionshim() //call iframe shim function | ||
+ | } | ||
+ | }, | ||
+ | |||
+ | contains_firefox:function(a, b) { | ||
+ | while (b.parentNode) | ||
+ | if ((b = b.parentNode) == a) | ||
+ | return true; | ||
+ | return false; | ||
+ | }, | ||
+ | |||
+ | dynamichide:function(e, obj2){ //obj2 refers to tab menu item mouse is currently over | ||
+ | var evtobj=window.event? window.event : e | ||
+ | if (this.ie&&!this.dropmenuobj.contains(evtobj.toElement)) | ||
+ | this.delayhidemenu(obj2) | ||
+ | else if (this.firefox&&e.currentTarget!= evtobj.relatedTarget&& !this.contains_firefox(evtobj.currentTarget, evtobj.relatedTarget)) | ||
+ | this.delayhidemenu(obj2) | ||
+ | }, | ||
+ | |||
+ | delayhidemenu:function(obj2){ | ||
+ | this.delayhide=setTimeout(function(){tabdropdown.dropmenuobj.style.visibility='hidden'; if (obj2.parentNode.className.indexOf('default')==-1) obj2.parentNode.className=''},this.disappeardelay) //hide menu | ||
+ | }, | ||
+ | |||
+ | clearhidemenu:function(){ | ||
+ | if (this.delayhide!="undefined") | ||
+ | clearTimeout(this.delayhide) | ||
+ | }, | ||
+ | |||
+ | positionshim:function(){ //display iframe shim function | ||
+ | if (this.enableiframeshim && typeof this.shimobject!="undefined"){ | ||
+ | if (this.dropmenuobj.style.visibility=="visible"){ | ||
+ | this.shimobject.style.width=this.dropmenuobj.offsetWidth+"px" | ||
+ | this.shimobject.style.height=this.dropmenuobj.offsetHeight+"px" | ||
+ | this.shimobject.style.left=this.dropmenuobj.style.left | ||
+ | this.shimobject.style.top=this.dropmenuobj.style.top | ||
+ | } | ||
+ | this.shimobject.style.display=(this.dropmenuobj.style.visibility=="visible")? "block" : "none" | ||
+ | } | ||
+ | }, | ||
+ | |||
+ | hideshim:function(){ | ||
+ | if (this.enableiframeshim && typeof this.shimobject!="undefined") | ||
+ | this.shimobject.style.display='none' | ||
+ | }, | ||
+ | |||
+ | isSelected:function(menuurl){ | ||
+ | var menuurl=menuurl.replace("http://"+menuurl.hostname, "").replace(/^\//, "") | ||
+ | return (tabdropdown.currentpageurl==menuurl) | ||
+ | }, | ||
+ | |||
+ | init:function(menuid, dselected){ | ||
+ | this.standardbody=(document.compatMode=="CSS1Compat")? document.documentElement : document.body //create reference to common "body" across doctypes | ||
+ | var menuitems=document.getElementById(menuid).getElementsByTagName("a") | ||
+ | for (var i=0; i<menuitems.length; i++){ | ||
+ | if (menuitems[i].getAttribute("rel")){ | ||
+ | var relvalue=menuitems[i].getAttribute("rel") | ||
+ | document.getElementById(relvalue).firstlink=document.getElementById(relvalue).getElementsByTagName("a")[0] | ||
+ | menuitems[i].onmouseover=function(e){ | ||
+ | var event=typeof e!="undefined"? e : window.event | ||
+ | tabdropdown.dropit(this, event, this.getAttribute("rel")) | ||
+ | } | ||
+ | } | ||
+ | if (dselected=="auto" && typeof setalready=="undefined" && this.isSelected(menuitems[i].href)){ | ||
+ | menuitems[i].parentNode.className+=" selected default" | ||
+ | var setalready=true | ||
+ | } | ||
+ | else if (parseInt(dselected)==i) | ||
+ | menuitems[i].parentNode.className+=" selected default" | ||
+ | } | ||
+ | } | ||
+ | |||
+ | } | ||
+ | </script> | ||
+ | <style> | ||
+ | .ddcolortabs{ | ||
+ | padding: 0; | ||
+ | width: 100%; | ||
+ | background: transparent; | ||
+ | voice-family: "\"}\""; | ||
+ | voice-family: inherit; | ||
+ | } | ||
+ | |||
+ | .ddcolortabs ul{ | ||
+ | font: normal 11px Arial, Verdana, sans-serif; | ||
+ | margin:0; | ||
+ | padding:0; | ||
+ | list-style:none; | ||
+ | } | ||
+ | |||
+ | .ddcolortabs li{ | ||
+ | display:inline; | ||
+ | margin:0 2px 0 0; | ||
+ | padding:0; | ||
+ | text-transform:uppercase; | ||
+ | } | ||
+ | |||
+ | |||
+ | .ddcolortabs a{ | ||
+ | float:left; | ||
+ | color: white; | ||
+ | background: black url(media/color_tabs_left.gif) no-repeat left top; | ||
+ | margin:0 2px 0 0; | ||
+ | padding:0 0 1px 3px; | ||
+ | text-decoration:none; | ||
+ | letter-spacing: 1px; | ||
+ | } | ||
+ | |||
+ | .ddcolortabs a span{ | ||
+ | float:left; | ||
+ | display:block; | ||
+ | background: transparent url(media/color_tabs_right.gif) no-repeat right top; | ||
+ | padding: 4px 8px 2px 7px; | ||
+ | } | ||
+ | |||
+ | .ddcolortabs a span{ | ||
+ | float:none; | ||
+ | } | ||
+ | |||
+ | .ddcolortabs a:hover{ | ||
+ | background-color: #591f20; | ||
+ | } | ||
+ | |||
+ | .ddcolortabs a:hover span{ | ||
+ | background-color: #591f20; | ||
+ | } | ||
+ | |||
+ | .ddcolortabs .selected a, #ddcolortabs .selected a span{ /*currently selected tab*/ | ||
+ | background-color: #591f20; | ||
+ | } | ||
+ | |||
+ | .ddcolortabsline{ | ||
+ | clear: both; | ||
+ | padding: 0; | ||
+ | width: 100%; | ||
+ | height: 8px; | ||
+ | line-height: 8px; | ||
+ | background: black; | ||
+ | border-top: 1px solid #fff; /*Remove this to remove border between bar and tabs*/ | ||
+ | } | ||
+ | |||
+ | /* ######### Style for Drop Down Menu ######### */ | ||
+ | |||
+ | .dropmenudiv_a{ | ||
+ | position:absolute; | ||
+ | top: 0; | ||
+ | border: 1px solid black; /*THEME CHANGE HERE*/ | ||
+ | border-top-width: 8px; /*Top border width. Should match height of .ddcolortabsline above*/ | ||
+ | border-bottom-width: 0; | ||
+ | font:normal 12px Arial; | ||
+ | line-height:18px; | ||
+ | z-index:100; | ||
+ | background-color: white; | ||
+ | width: 200px; | ||
+ | visibility: hidden; | ||
+ | } | ||
+ | |||
+ | |||
+ | .dropmenudiv_a a{ | ||
+ | width: auto; | ||
+ | display: block; | ||
+ | text-indent: 5px; | ||
+ | border-top: 0 solid #678b3f; | ||
+ | border-bottom: 1px solid #678b3f; /*THEME CHANGE HERE*/ | ||
+ | padding: 2px 0; | ||
+ | text-decoration: none; | ||
+ | color: black; | ||
+ | } | ||
+ | |||
+ | * html .dropmenudiv_a a{ /*IE only hack*/ | ||
+ | width: 100%; | ||
+ | } | ||
+ | |||
+ | .dropmenudiv_a a:hover{ /*THEME CHANGE HERE*/ | ||
+ | background-color: #8a3c3d; | ||
+ | color: white; | ||
+ | } | ||
+ | </style> | ||
+ | </head> | ||
+ | |||
+ | <!-- CSS for Drop Down Tabs Menu #1 --> | ||
+ | <link rel="stylesheet" type="text/css" href="ddcolortabs.css" /> | ||
+ | |||
+ | <div id="colortab" class="ddcolortabs"> | ||
+ | <ul> | ||
+ | <li><a href="https://2008.igem.org/Team:Edinburgh" title="Home"><span>Home</span></a></li> | ||
+ | <li><a href="https://2008.igem.org/Team:Edinburgh/Project" title="Project" rel="dropmenu1_a"><span>The Project</span></a></li> | ||
+ | <li><a href="https://2008.igem.org/Team:Edinburgh/Team" title="Team" ><span>The Team</span></a></li> | ||
+ | <li><a href="https://2008.igem.org/Team:Edinburgh/Modeling" title="Modeling" rel="dropmenu2_a"><span>Modeling</span></a></li> | ||
+ | <li><a href="https://2008.igem.org/Team:Edinburgh/Notebook" title="Notebook"><span>Notebook</span></a></li> | ||
+ | </ul> | ||
+ | </div> | ||
+ | <div class="ddcolortabsline"> </div> | ||
+ | <div id="dropmenu1_a" class="dropmenudiv_a"> | ||
+ | <a href="https://2008.igem.org/Team:Edinburgh/Team">Overview</a> | ||
+ | <a href="https://2008.igem.org/Team:Edinburgh/Team">Step1</a> | ||
+ | <a href="https://2008.igem.org/Team:Edinburgh/Team">Step2</a> | ||
+ | </div> | ||
+ | <script type="text/javascript"> | ||
+ | //SYNTAX: tabdropdown.init("menu_id", [integer OR "auto"]) | ||
+ | tabdropdown.init("colortab", 3) | ||
+ | </script> | ||
+ | </html> | ||
+ | |||
+ | |||
==Modelling== | ==Modelling== | ||
Revision as of 15:56, 22 July 2008
Modelling
Equation of fermentation reaction/Metabism
CH1.8O0.5N0.2 + 0.41915O2 = 0.62CH1.77O0.49N0.24 + 0.0512NH3 + 0.2745H2O + 0.38CO2