Team:Bologna/Modeling

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Logo1a.gifTestata dx.jpg
HOME THE PROJECT THE TEAM PARTS SUBMITTED TO THE REGISTRY MODELING NOTEBOOK BIOSAFETY


Mathematical Model


Circuito2.jpg

The behavior of this device and the conditions for bistability can be understood using the following differential equations for the network:


Equazione0.jpg


Where:
α = promoter activity and rbs
δ = coefficient of degradation (cellular diluition)
μ = coefficient of cooperativity


Equazione3.jpg







Equazione4.jpg






Equazione5.jpg






Equazione6.jpg






Equazione7.jpg






Equazione8.jpg






Equazione9.jpg






Equazione10.jpg













The circuit in Figure 1 can be modeled with the following equations:

Eq1.jpg

Where:

Tab.jpg
In the model we distinguish between protein binded to repressor (
F01.jpg
)and protein free, not binded to repressor (
F02.jpg
), in this case repressor is represented by IPTG. Knowing that
F1a.jpg
and the law of mass action
F2a.jpg
is possible write
F3.jpg
where we can replace
F4.jpg
represents the entry of IPTG inside the cell. The same thing can be done even for LexA obtaining
F5.jpg
where
F6.jpg
represents the UV radiation.

Placing:

F7.jpg


Bibliography

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