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Team:ETH Zurich/Modeling/Switch Circuit
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Revision as of 13:04, 27 October 2008 by
Nico
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Contents
1
Switch Circuit
2
Detailed Model
2.1
diffusion of IPTG
2.2
diffusion of tet
2.3
binding of tetR to LacI-promotor and LacIIs-promotor
2.4
binding of LacI and LacIIs to GFP-promotor
2.5
binding of tet to tetR
2.6
binding of IPTG to LacI
2.7
transcription and translation of LacI
2.8
transcription and translation of LacIIs
2.9
transcription and translation of tetR
2.10
transcription and translation of GFP
2.11
dimerization of tetR
2.12
dimerization and tetramerization of LacI and LacIIs
3
Implementation
4
Simulation
5
Results and Discussion
6
Parameters
7
References
Switch Circuit
Detailed Model
diffusion of IPTG
diffusion of tet
binding of tetR to LacI-promotor and LacIIs-promotor
binding of LacI and LacIIs to GFP-promotor
File:Binding LacIIs to Pgfp.jpg
File:Binding LacI to Pgfp.jpg
binding of tet to tetR
File:Binding tet to tetR.jpg
binding of IPTG to LacI
File:Binding IPTG to LacI.jpg
transcription and translation of LacI
File:Transcription of LacI.jpg
File:Translation of LacI.jpg
transcription and translation of LacIIs
File:Transcription of LacIIs.jpg
File:Translation of LacIIs.jpg
transcription and translation of tetR
File:Transcription of tetR.jpg
File:Translation of tetR.jpg
transcription and translation of GFP
File:Transcription of gfp.jpg
File:Translation of gfp.jpg
dimerization of tetR
File:Dimerization of tetR.jpg
dimerization and tetramerization of LacI and LacIIs
File:Dimerization of LacI.jpg
File:Dimerization of LacIIs.jpg
File:Tetramerization of LacI.jpg
File:Tetramerization of LacIIs.jpg
Implementation
Simulation
Results and Discussion
Parameters
References
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