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Team:NTU-Singapore/Notebook/12 September 2008
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NTU@iGEM
Project
Introduction
Methodology
Team
Introduction
Team background
Notebook
Dry Lab
Introduction
ODEs used
Modeling Constructs
Parameters used
Deterministic Modeling
Sensitivity Analysis
Stochastic Modeling
Wetlab
Introduction
Materials and Equipment
Protocols
Verification of Detection & Lysis System
Our New Parts
Characterization
Introduction
Standard Promoters
Characterization of pLacI-GFP
pLacI-GFP images and clips
Characterization of pLsrA-YFP
New characterization Proposal
Parameter Estimation & Correlations
Acknowledgements
Friday 12 September:
1200am: punching and dilution into TE buffer at 50 degrees C of
pSB2K3
(for obtaining plasmid vector with KanR).
1230pm: digestion with E/P for Detection system (LsrA-RBS-Lysis-Term) (insert) and pSB2K3 (vector). Incubate for 2 hours until 3pm.
2pm-530pm: prepare LBK plates.
3pm-415pm: MinElute purification and Ligation (followed by another purification) for the insert and vector digested at 1230pm.
4pm: punching for
BBa_E0430
(RBS-YFP-Term) and
BBa_E0420
(RBS-CFP-Term)
430-6pm: Transformation for:
RBS-YFP-Term and RBS-YFP-Term into Top10 cells. (LBA plates)
LsrA-RBS-Lysis-Term (insert) ligated with pSB2K3 (vector) into top10 (and use LBK plate for selection).
Detection system (LsrA-RBS-Lysis-Term) and Production system (LacI-RBS-E7-Term) into LuxS k/o (LBA plates).