Team:Paris/Notebook/Freezer

From 2008.igem.org

(Difference between revisions)
(Plasmids : MiniPrep Products)
(Plasmids : MiniPrep Products)
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|- style="background: #cccccc;"   
|- style="background: #cccccc;"   
| style="background: #ccffcc;" |MP2
| style="background: #ccffcc;" |MP2
-
||[http://partsregistry.org/Part:BBa_J23107 pJ23107] in [http://partsregistry.org/Part:BBa_J61002 J61002]
+
|[http://partsregistry.org/Part:BBa_J23107 pJ23107] in [http://partsregistry.org/Part:BBa_J61002 J61002]
|Medium constitutive promoter in J61002 (clones 1 + 2) <partinfo>pJ23107 SpecifiedComponents</partinfo>
|Medium constitutive promoter in J61002 (clones 1 + 2) <partinfo>pJ23107 SpecifiedComponents</partinfo>
|MP2.2  
|MP2.2  
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|- style="background: #cccccc;"   
|- style="background: #cccccc;"   
| style="background: #ccffcc;" |MP3
| style="background: #ccffcc;" |MP3
-
|<bbpart>B0015</bbpart> in <bbpart>pSB1AK3</bbpart>
+
|[http://partsregistry.org/Part:BBa_B0015 B0015] in [http://partsregistry.org/Part:BBa_SB1Ak3 pSB1AK3]
|Double terminator (clones 1 + 2) <partinfo>B0015 SpecifiedComponents</partinfo>
|Double terminator (clones 1 + 2) <partinfo>B0015 SpecifiedComponents</partinfo>
|MP3.3, MP3.4
|MP3.3, MP3.4
-
| [[Paris/August 14| August 14]]
+
| [[Paris/August 14 2007| August 14 2007]]
|- style="background: #cccccc;"   
|- style="background: #cccccc;"   
| style="background: #ccffcc;" |MP4
| style="background: #ccffcc;" |MP4

Revision as of 10:57, 22 July 2008

PCR Products

PCR products
Number Name Oligo F Oligo R Matrix Length Comments Product Left ? []ng/µL Date
P1 Lox71-FtsA-FtsZ-1 O3 Lox71-FtsA-F O4 DEcoR1-FtsZ-R MG1655 1537 Ø
P2 FtsZ-2 O5 DEcoR1-FtsZ-F O2 FtsZ-R MG1655 1088 Ø
P3 DGAT-1 27 ForDGAT1 13 DPst1-DGAT-R Miniprep pKS::DGAT 1087 July 31
P4 DGAT-2 12 DPst1-DGAT 27 Rev-DGAT1 Miniprep pKS::DGAT 396 July 31
P5 Lox66-DapAColi O6 Lox66-DapAColi-F O7 DapAColi-R MG1655 985 Ø July 17, July 30
P6 Lox66-DapASubtilis O8 Lox66-DapASubt-F O9 DapASubt-R B.Subtilis 168 979 July 17, July 27, July 30
P7 Lox71-FtsZ O1 Lox71-FtsZ-F O2 FtsZ-R MG1655 1260 EcoRI site in FtsZ not mutated July 17, July 30
P8 RBS-DapAColi O20 RBS-DapAColi-F O7 DapAColi-R MG1655 952 B0030-DapAColi July 23, July 30
P9 RBS-DapASubtilis O21 RBS-DapASubt-F O9 DapASubt-R B.Subtilis 168 946 B0030-DapASubtilis July 23, July 27
P10 Lox71-FtsA-FtsZ O3 Lox71-FtsA-F O2 FtsZ-R MG1655 2580 EcoRI site in FtsZ not mutated July 23
P11 Lox71-KmR-Lox66 O10 Lox71-KmR-F O11 Lox66-KmR-R MP12 1084 July 27, July 30
P13 DGAT deltaPst-1 ForDGAT1 Megaprimer DGAT2 DNA plasmid (pKS::DGAT): 1443 August 1
P14 DGAT deltaPst-1 biobrick ForDGAT1bb RevDGAT1bb DGAT deltaPst1 1504 August 2 Oct. 18
P15 PacI [pTet>>lox-GFP-loxmRFP] XmaI O47 O48 [pTet>>lox-GFP-loxmRFP] L59.6 2kb August 2
P16 PrefixBB-frt1-CmR-frt2-SufixBB O51 O52 pY-2C-IntC 1kb Oct. 15
P17 PrefixBB-frt1-CmR-frt2-T1T2-SufixBB O51 O53 pY-2C-IntC >1kb Oct. 18

Plasmids : MiniPrep Products

Plasmids: MiniPrep Products
Number Name Description Products in use Date
MP1 [http://partsregistry.org/Part:BBa_J23100 pJ23100] in [http://partsregistry.org/Part:BBa_J61002 J61002] Strong constitutive promoter in J61002 (clones 1 + 2) <partinfo>pJ23100 SpecifiedComponents</partinfo> July 15 2007, Aug. 17 2007
MP2 [http://partsregistry.org/Part:BBa_J23107 pJ23107] in [http://partsregistry.org/Part:BBa_J61002 J61002] Medium constitutive promoter in J61002 (clones 1 + 2) <partinfo>pJ23107 SpecifiedComponents</partinfo> MP2.2 July 15 2007, Aug. 17 2007
MP3 [http://partsregistry.org/Part:BBa_B0015 B0015] in [http://partsregistry.org/Part:BBa_SB1Ak3 pSB1AK3] Double terminator (clones 1 + 2) <partinfo>B0015 SpecifiedComponents</partinfo> MP3.3, MP3.4 August 14 2007
MP4 <bbpart>I0500</bbpart> in <bbpart>pSB2K3</bbpart> AraC pBAD (clones 1 + 2) <partinfo>I0500 SpecifiedComponents</partinfo> July 16
MP5 <bbpart>BBa_B0030</bbpart> in <bbpart>pSB1A2</bbpart> Strong RBS (clones 1 + 2) <partinfo>B0030 SpecifiedComponents</partinfo> July 18
MP6 <bbpart>BBa_E0422</bbpart> in <bbpart>pSB1A2</bbpart> ECFP (RBS+LVA+Term) (clones 1 + 2) <partinfo>E0422 SpecifiedComponents</partinfo> MP6'.1, MP6'.2 July 18, July 24
MP7 <bbpart>BBa_E0241</bbpart> in <bbpart>pSB1A2</bbpart> PoPs to GFP converter (clones 1 + 2) <partinfo>BBa_E0241 DeepComponents</partinfo> MP7'.1 July 18, July 24
MP8 <bbpart>BBa_E0840</bbpart> in <bbpart>pSB1A2</bbpart> gfp tri-part; strong rbs (clones 1 + 2) <partinfo>E0840 SpecifiedComponents</partinfo> July 18
MP9 <bbpart>BBa_J61047</bbpart> in <bbpart>pSB1A2</bbpart> Cre ORF (clones 1 + 2) <partinfo>J61047 SpecifiedComponents</partinfo> MP9'.1, MP9'.2 July 18, July 24
MP10 <bbpart>BBa_I0500</bbpart> in <bbpart>pSB2K3</bbpart> AraC pBAD (clones 1 + 2) <partinfo>I0500 SpecifiedComponents</partinfo> July 20
MP11 <bbpart>BBa_pJ23107</bbpart> in <bbpart>p61002</bbpart> Medium constitutive promoter in J61002 (clones 3 + 4) <partinfo>pJ23107 SpecifiedComponents</partinfo> MP11'.3 July 20, July 23
MP12 <bbpart>BBa_P1003</bbpart> in <bbpart>pSB1A2</bbpart> KanR <partinfo>P1003 SpecifiedComponents</partinfo> July 27
MP13 <bbpart>BBa_J61002</bbpart> ptet-mRFP <partinfo>J61002 SpecifiedComponents</partinfo> MP13.1, MP13.2 August 14
MP14 <bbpart>BBa_J61025</bbpart> Medium constitutive promoter in J61002 (clones 1 + 2) <partinfo>BBa_J61025 SpecifiedComponents</partinfo> MP14.1, MP14.2 August 14
L1 <bbpart>BBa_I0500</bbpart> in <bbpart>J61002</bbpart> construct with pBad promotor regulating expression of mRFP <partinfo>I0500 SpecifiedComponents</partinfo> L1".1, L1".2 August 14
AttB MP15 August 14
AttP Finished MP16 July 25, July 27, Aug 7
L2 Lox66DapAE.coli in <bbpart>pSB1A2</bbpart> Insertion of lox66DapAE.coli construct as a biobrick in pSB1A2 plasmid

http://parts.mit.edu/registry/images/9/9f/Part_icon_dna.png http://parts.mit.edu/registry/images/7/7b/Part_icon_cds.png

July 25
L6 <bbpart>BBa_B0030</bbpart>+<bbpart>BBa_J61047</bbpart> strong RBS(B0030)-Cre ORF

http://parts.mit.edu/r/parts/images/partbypart/icon_rbs.png http://parts.mit.edu/registry/images/7/7b/Part_icon_cds.png

L6.1, L6.2, L6.3, L6".1, L6".2 July 25, July 27
L9 lox66 in <bbpart>pSB1A2</bbpart> July 25, July 30
L10 lox71 in <bbpart>pSB1A2</bbpart> July 25, July 30
L12 lox71-gfp in pSB1A2 construction of the biobrick lox71-gfp

http://parts.mit.edu/registry/images/9/9f/Part_icon_dna.png http://parts.mit.edu/r/parts/images/partbypart/icon_reporter.png

L12.1 & L12.2 July 30
L26 araC/pbad>>RBS-Cre in <bbpart>J61002</bbpart> ligation ( Aug.13) of RBS-Cre as a CDS behind pbad in <bbpart>J61002</bbpart> L26.1 (no more) & L26.2 Aug. 17
L29 gfptripart-lox66 <bbpart>pSB1A2</bbpart> ligation ( Aug.13) of gfp-tripart in front of lox66 L29.1 & L29.2 Aug. 17
L30 dapAp>>mRFP in <bbpart>J61002</bbpart> dapAp promotor placed( Aug.13) upstream of mRFP <bbpart>J61002</bbpart> L30A1 & L30A2 Aug. 17
L31 lox71-<bbpart>B0015</bbpart>(T) in <bbpart>pSB1A2</bbpart> L31.1 & L31.3 Aug. 20
L32 <bbpart>B0015</bbpart>(T)-lox66 in <bbpart>pSB1A2</bbpart> L32.1 & L32.2 Aug. 20
L34 pTet>>lox71-gfptripart in <bbpart>pSB1A2</bbpart> L34.1 & L34.2 Aug. 20
L35 araC/pBad>>lox71-gfptripart in <bbpart>pSB1A2</bbpart> il manque la seq. de 740-1410 L35.1 & L35.2 Aug. 20
L36 lox66-mRFP L36.1 & L36.2 Aug. 20
L37 lox66-RBS-dapAcoli L37.1 & L37.2 Aug. 20
L39 RBS-dapAcoli cloned in <bbpart>pSB1A2</bbpart> L39.1 & L39.2 Aug. 20
L46 pTet>>lox71-B0015(T) in <bbpart>pSB1A2</bbpart> L46.1 Sep. 18
L53 B0015(T)-lox66-RBSDapAcoli in <bbpart>pSB1A2</bbpart> L53.7 Sep. 18
L56 B0015(T)-lox66-RBSdapAsubtilis in <bbpart>pSB1A2</bbpart> L56.3 (attention, seq a partiellement foiré, refaire seq) Sep. 18
L59 pTet>>lox71-gfptripart-lox66-mRFP <bbpart>pSB1A2</bbpart> L59.6 (attention, seq avec O40 a foiré, mais les extrémités sont bonnes, je pense que c ok car les colonies sont vertes) Sep. 18
L64 RBSdapAsubtilis cloned in <bbpart>pSB1A2</bbpart> L564.1 & L64.2 Sep. 18
MPT1 Lox66-DapAColi pTOPO P5 MPT1.1, MPT1.2 Aug 7
MPT3 Lox66-DapASubtilis pTOPO P6 MPT3.2, MPT3.1 Aug 7
MPT4 RBS-DapAColi pTOPO P8 MPT4.1, .2, .3, .4& .5 Aug 7
MPT5 RBS-DapASubtilis pTOPO P9 MPT5.1, .2 &.3 Aug 7
MP15 pKD46 Oct 2