Team:University of Washington/Modeling

From 2008.igem.org

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<!-- *** What falls between these lines is the Alert Box!  You can remove it from your pages once you have read and understood the alert *** -->
 
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This is a template page. READ THESE INSTRUCTIONS.
 
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<div id="instructions" style="text-align: center; font-weight: normal; font-size: small; color: #f6f6f6; padding: 5px;">
 
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You are provided with this team page template with which to start the iGEM season.  You may choose to personalize it to fit your team but keep the same "look." Or you may choose to take your team wiki to a different level and design your own wiki.  You can find some examples <a href="https://2008.igem.org/Help:Template/Examples">HERE</a>.
 
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You <strong>MUST</strong> have a team description page, a project abstract, a complete project description, and a lab notebook.  PLEASE keep all of your pages within your Team:Example namespace. 
 
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For the time being, all traffic please divert to:
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http://igemmodel.blogspot.com/
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Thanks!
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{|align="justify"
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|You can write a background of your team here.  Give us a background of your team, the members, etc.  Or tell us more about something of your choosing.
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Intro
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In equilibrium this portion of the Wiki will elucidate the modeling choices and serve as the resting place for the published models of the system.  The transitory response of this page will serve as a sort of blog detailing the high jinks, hiccups, and pertinent ideas explored during the team's run.
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The Goal
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The overall goal of the modeling process will be to accurately model the entire system, that is to say from input signaling molecules to conjugation. Our team has decided on two sets of inputs: Glucose(rather absence of glucose) and Lactose, and tetracycline and arabinose.  The output of these 'and gates' will be LuxR, which will bind with AHL (produced by Yeast) and will activate transcription of conjugation genes.  The AHL+LuxR complex serves as a second, cascaded 'and gate.' Ideally the models for individual circuit stages may be coupled together to form more complex and accurate models of the larger system.
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Why Model the System?
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Early Hangups:
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Technical Choices:
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Source Review and Works Cited:
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Blog:
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Week1:
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Tell us more about your project.  Give us background.  Use this is the abstract of your project.  Be descriptive but concise (1-2 paragraphs)''
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|[[Image:Team.png|right|frame|Your team picture]]
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|align="center"|[[Team:University_of_Washington | Team Example 2]]
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<!--- The Mission, Experiments --->
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{| style="color:#1b2c8a;background-color:#0c6;" cellpadding="3" cellspacing="1" border="1" bordercolor="#fff" width="62%" align="center"
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!align="center"|[[Team:University_of_Washington|Home]]
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!align="center"|[[Team:University_of_Washington/Team|The Team]]
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!align="center"|[[Team:University_of_Washington/Project|The Project]]
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!align="center"|[[Team:University_of_Washington/Parts|Parts Submitted to the Registry]]
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!align="center"|[[Team:University_of_Washington/Modeling|Modeling]]
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!align="center"|[[Team:University_of_Washington/Notebook|Notebook]]
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(''Or you can choose different headings.  But you must have a team page, a project page, and a notebook page.'')
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===Note===
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If you choose to include a '''Modeling''' page, please write about your modeling adventures here.  This is not necessary but it may be a nice list to include.
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Revision as of 03:10, 8 August 2008


For the time being, all traffic please divert to:

http://igemmodel.blogspot.com/

Thanks!