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Team:University of Lethbridge/Notebook/Project3October
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===October 7 2008=== | ===October 7 2008=== | ||
| - | + | ====Andrew, Nathan Puhl==== | |
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Ran a gel to confirm presence of DNA from PCR on September 30 2008. DNA present in all wells, so a 2% agaraose gel was prepared for a gel extraction of DNA. 40uL of DNA was loaded and gel extracted using a kit. | Ran a gel to confirm presence of DNA from PCR on September 30 2008. DNA present in all wells, so a 2% agaraose gel was prepared for a gel extraction of DNA. 40uL of DNA was loaded and gel extracted using a kit. | ||
| - | [[Image: | + | [[Image:rpsA Gel Extraction.jpg|250 px]] |
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| - | + | ===October 14 2008=== | |
| + | ====Andrew==== | ||
Ran 1uL of gel extraction products on a gel to determine presence/quantity of DNA. | Ran 1uL of gel extraction products on a gel to determine presence/quantity of DNA. | ||
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Band close to ~150 bp for the +18 rpsA DNA, which is approximately the correct size. | Band close to ~150 bp for the +18 rpsA DNA, which is approximately the correct size. | ||
No band present for the +1 TIR DNA, meaning gel extraction was not successful. | No band present for the +1 TIR DNA, meaning gel extraction was not successful. | ||
| + | |||
===October 16 2008=== | ===October 16 2008=== | ||
| + | ====Andrew==== | ||
| - | + | Ligation of +18 rpsA DNA into pGEM T-easy beacuse primer design requires DNA to be in a plasmid for endonuclease activity of restriction enzymes. | |
| - | + | ||
| - | Ligation of +18 rpsA DNA into pGEM | + | |
Heat deactivated at 65 C after 1 hour incubation at 37 C. | Heat deactivated at 65 C after 1 hour incubation at 37 C. | ||
| - | |||
===October 21 2008=== | ===October 21 2008=== | ||
| + | ====Andrew==== | ||
| - | + | Transformation of +18 rpsA TIR DNA into pGEM T-easy to make enough DNA to be restricted/ligated into biobrick format. (psB1A2) | |
| - | + | ||
| - | Transformation of +18 rpsA TIR DNA into pGEM | + | |
50 uL og xgal added to LB + amp plates to screen for blue and white colonies. | 50 uL og xgal added to LB + amp plates to screen for blue and white colonies. | ||
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===October 22 2008=== | ===October 22 2008=== | ||
| - | + | ====Andrew==== | |
| - | + | ||
| - | Transformation into pGEM | + | Transformation into pGEM T-easy successful, many white and some blue colonie on both plates. |
Picked 3 colonies from each plate to grow in 5mL LB + amp for a pDNA prep. | Picked 3 colonies from each plate to grow in 5mL LB + amp for a pDNA prep. | ||
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===October 23 2008=== | ===October 23 2008=== | ||
| - | + | ====Andrew==== | |
| - | + | ||
pDNA prep of 6 culture tubes using a kit | pDNA prep of 6 culture tubes using a kit | ||
Latest revision as of 02:23, 30 October 2008
Back to The University of Lethbridge Main Notebook
Contents |
October 7 2008
Andrew, Nathan Puhl
Ran a gel to confirm presence of DNA from PCR on September 30 2008. DNA present in all wells, so a 2% agaraose gel was prepared for a gel extraction of DNA. 40uL of DNA was loaded and gel extracted using a kit.
October 14 2008
Andrew
Ran 1uL of gel extraction products on a gel to determine presence/quantity of DNA.
Band close to ~150 bp for the +18 rpsA DNA, which is approximately the correct size. No band present for the +1 TIR DNA, meaning gel extraction was not successful.
October 16 2008
Andrew
Ligation of +18 rpsA DNA into pGEM T-easy beacuse primer design requires DNA to be in a plasmid for endonuclease activity of restriction enzymes.
Heat deactivated at 65 C after 1 hour incubation at 37 C.
October 21 2008
Andrew
Transformation of +18 rpsA TIR DNA into pGEM T-easy to make enough DNA to be restricted/ligated into biobrick format. (psB1A2)
50 uL og xgal added to LB + amp plates to screen for blue and white colonies.
October 22 2008
Andrew
Transformation into pGEM T-easy successful, many white and some blue colonie on both plates.
Picked 3 colonies from each plate to grow in 5mL LB + amp for a pDNA prep.
October 23 2008
Andrew
pDNA prep of 6 culture tubes using a kit
