Team:Chiba/Calendar-Home/25 August 2008

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Revision as of 06:12, 30 October 2008

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24 August 2008 <|> 26 August 2008

Laboratory work

Team:Input

The following glycerol Stock was made.

[http://partsregistry.org/Part:BBa_J22136 BBa_J22136](insert check OK)

Picked the colony and incubate with 2mL of LB-Ampicillin Medium for 12 hours at 37 degrees. Took 180μl from culture,and mixed with 880μlLB-Amp Medium.(OD=0.485)

Liquid culture(OD=0.495)	0.67μl
60%Glycerol	0.33μl
20%Glycerol Stock	1.00ml

Team:Communication

(24/8)--->Digestion

Double Digestion:[http://partsregistry.org/Part:BBa_J04500 BBa_J04500](2007)
Double Digesiton:[http://partsregistry.org/Part:BBa_R0010 BBa_R0010](2007)
Single Digestion:[http://partsregistry.org/Part:BBa_R0010 BBa_R0010](2007)
[http://partsregistry.org/Part:BBa_R0010 BBa_R0010](2007)

Sample No.	1	2	3	4
Sample DNA(μL)	5	5	1	1
EcoRI(μL)	0.5	0.5	-	-
SpeI(μL)	0.5	0.5	-	-
Buffer 1	1	1	-	-
Buffer 3(μL)	-	-	1	-
BSA(μL)	1	1	-	-
dH₂O(μL)	2	2	7.5	-
TOTAL(μL)	10	10	10	1

--->Gel Check

Sample No.	1~3	4
Sample DNA(μL)	10	1
Loading Dye(μL)	2	1
dH₂O(μL)	-	4
TOTAL(μL)	12	6

From right;

Double Digestion:[http://partsregistry.org/Part:BBa_J04500 BBa_J04500](2007) -> OK
Double Digesiton:[http://partsregistry.org/Part:BBa_R0010 BBa_R0010](2007) -> ?(low)
Single Digestion:[http://partsregistry.org/Part:BBa_R0010 BBa_R0010](2007) -> ?(low)
[http://partsregistry.org/Part:BBa_R0010 BBa_R0010](2007) -> OK(low)

--->Digestion (Double Digestion)

[http://partsregistry.org/Part:BBa_C0178 BBa_C0178]
[http://partsregistry.org/Part:BBa_C0170 BBa_C0170]
[http://partsregistry.org/Part:BBa_J04500 BBa_J04500](2007)

Sample No.	1	2	3
Sample DNA(μL)	33ng/μl×60μl	33ng/μl×60μl	100ng/μl×20μl
PstI(μL)	2	2	2
XbaI(μL)	2	2	-
SpeI(μL)	-	-	2
Buffer 2(μL)	-	-	5
Buffer 3(μL)	10	10	-
BSA(μL)	10	10	5
dH₂O(μL)	16	16	16
TOTAL(μL)	100	100	52

Team:Output

PCR

[http://partsregistry.org/Part:BBa_E2030 BBa_E2030](1)
[http://partsregistry.org/Part:BBa_J33202 BBa_J33202](2)
BL21(3)
[http://partsregistry.org/Part:BBa_J52008 BBa_J52008](4)
[http://partsregistry.org/Part:BBa_I712019 BBa_I712019](5)

No.	1	2	3	4	5
DNA tamplate	1	1	1	1	1
FW primer	5(Venus_YFP_fwd)	5(LacZ_fwd)	5(LacZ_fwd)	5(rLUC_fwd)	5(fLuc_fwd)
VR primer	5(VR)	5(LacZ_rev)	5(LacZ_rev)	5(VR)	5(VR)
dNTPmix	10	10	10	10	10
Thermo pol buffer	10	10	10	10	10
DNA pol(VENT)	1	1	1	1	1
dH₂O	68	68	68	68	68
TOTAL	100μl	100μl	100μl	100μl	100μl

-->Gel Check

No.	1	2	3	4	5
DNA tamplate	1	1	1	1	1
loading Dye	1	1	1	1	1
dH₂O	4	4	4	4	4
TOTAL	6μl	6μl	6μl	6μl	6μl

Mini prep

[http://partsregistry.org/Part:BBa_E2030 BBa_E2030]
[http://partsregistry.org/Part:BBa_F2620 BBa_F2620]

Transformation

[http://partsregistry.org/Part:BBa_E2030 BBa_E2030]
PUC19
pGFPUV
pGEX Venus YFP
Membren Venus YFP

PCR

[http://partsregistry.org/Part:BBa_J63001 BBa_J63001](1)

No.	1
DNA tamplate	1
FW primer(Venus)	5
VR primer	5
dNTPmix	10
Thermo pol buffer	10
DNA pol(VENT)	1
dH₂O	68
TOTAL	100μl

@@ Line 38: / Line 38: @@
 </tr>
 <tr>
-<td>Sample DNA</td>
+<td>Sample DNA(&mu;L)</td>
 <td>5</td><td>5</td><td>1</td><td>1</td>
 </tr>
 <tr>
-<td>EcoRI</td>
+<td>EcoRI(&mu;L)</td>
 <td>0.5</td><td>0.5</td><td>-</td><td>-</td>
 </tr>
 <tr>
-<td>SpeI</td>
+<td>SpeI(&mu;L)</td>
 <td>0.5</td><td>0.5</td><td>-</td><td>-</td>
 </tr>
@@ Line 54: / Line 54: @@
 </tr>
 <tr>
-<td>Buffer 3</td>
+<td>Buffer 3(&mu;L)</td>
 <td>-</td><td>-</td><td>1</td><td>-</td>
 </tr>
 <tr>
-<td>BSA</td>
+<td>BSA(&mu;L)</td>
 <td>1</td><td>1</td><td>-</td><td>-</td>
 </tr>
 <tr>
-<td>dH<sub>2</sub>O</td>
+<td>dH<sub>2</sub>O(&mu;L)</td>
 <td>2</td><td>2</td><td>7.5</td><td>-</td>
 </tr>
 <tr>
-<td>TOTAL</td>
+<td>TOTAL(&mu;L)</td>
-<td>10μl</td><td>10μl</td><td>10μl</td><td>1μl</td>
+<td>10</td><td>10</td><td>10</td><td>1</td>
 </tr>
 </table>
@@ Line 81: / Line 81: @@
 </tr>
 <tr>
-<td>Sample DNA</td>
+<td>Sample DNA(&mu;L)</td>
 <td>10</td><td>1</td>
 </tr>
 <tr>
-<td>Loading Dye</td>
+<td>Loading Dye(&mu;L)</td>
 <td>2</td><td>1</td>
 </tr>
 <tr>
-<td>dH<sub>2</sub>O</td>
+<td>dH<sub>2</sub>O(&mu;L)</td>
 <td>-</td><td>4</td>
 </tr>
 <tr>
-<td>TOTAL</td>
+<td>TOTAL(&mu;L)</td>
-<td>12μl</td><td>6μl</td>
+<td>12</td><td>6</td>
 </tr>
 </table>
@@ Line 117: / Line 117: @@
 </tr>
 <tr>
-<td>Sample DNA</td>
+<td>Sample DNA(&mu;L)</td>
 <td>33ng/μl×60μl</td><td>33ng/μl×60μl</td><td>100ng/μl×20μl</td>
 </tr>
 <tr>
-<td>PstI</td>
+<td>PstI(&mu;L)</td>
 <td>2</td><td>2</td><td>2</td>
 </tr>
 <tr>
-<td>XbaI</td>
+<td>XbaI(&mu;L)</td>
 <td>2</td><td>2</td><td>-</td>
 </tr>
 <tr>
-<td>SpeI</td>
+<td>SpeI(&mu;L)</td>
 <td>-</td><td>-</td><td>2</td>
 </tr>
 <tr>
-<td>Buffer 2</td>
+<td>Buffer 2(&mu;L)</td>
 <td>-</td><td>-</td><td>5</td>
 </tr>
 <tr>
-<td>Buffer 3</td>
+<td>Buffer 3(&mu;L)</td>
 <td>10</td><td>10</td><td>-</td>
 </tr>
 <tr>
-<td>BSA</td>
+<td>BSA(&mu;L)</td>
 <td>10</td><td>10</td><td>5</td>
 </tr>
 <tr>
-<td>dH<sub>2</sub>O</td>
+<td>dH<sub>2</sub>O(&mu;L)</td>
 <td>16</td><td>16</td><td>16</td>
 </tr>
 <tr>
-<td>TOTAL</td>
+<td>TOTAL(&mu;L)</td>
-<td>100μl</td><td>100μl</td><td>52μl</td>
+<td>100</td><td>100</td><td>52</td>
 </tr>
 </table>