Template:Team:UC Berkeley/Notebook/BX sequencing

From 2008.igem.org

(Difference between revisions)
(→BX140-BX189)
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| BX152 || 2008-08-11 || bxa39 || Clone #1 || ca998 || Didn't assemble || [[Team:UC Berkeley/Notebook/BX/BX152 | BX152]]
| BX152 || 2008-08-11 || bxa39 || Clone #1 || ca998 || Didn't assemble || [[Team:UC Berkeley/Notebook/BX/BX152 | BX152]]
|-
|-
-
| BX153 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX153 | BX153]]
+
| BX153 || 2008-08-12 || bxa8 || Clone #3 || ca998 || No read data || [[Team:UC Berkeley/Notebook/BX/BX153 | BX153]]
|-
|-
-
| BX154 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX154 | BX154]]
+
| BX154 || 2008-08-12 || bxa8 || Clone #4 || ca998 || No read data || [[Team:UC Berkeley/Notebook/BX/BX154 | BX154]]
|-
|-
-
| BX155 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX155 | BX155]]
+
| BX155 || 2008-08-12 || bxa8 || Clone #5 || ca998 || No read data || [[Team:UC Berkeley/Notebook/BX/BX155 | BX155]]
|-
|-
-
| BX156 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX156 | BX156]]
+
| BX156 || 2008-08-13 || bxa39 || Clone #3 || ca998 || Perfect || [[Team:UC Berkeley/Notebook/BX/BX156 | BX156]]
|-
|-
-
| BX157 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX157 | BX157]]
+
| BX157 || 2008-08-13 || bxa40 || Clone #1 || ca998 || Perfect || [[Team:UC Berkeley/Notebook/BX/BX157 | BX157]]
|-
|-
-
| BX158 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX158 | BX158]]
+
| BX158 || 2008-08-13 || bxa43 || Clone #1 || ca998 || Perfect || [[Team:UC Berkeley/Notebook/BX/BX158 | BX158]]
|-
|-
-
| BX159 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX159 | BX159]]
+
| BX159 || 2008-08-13 || bxa44 || Clone #2 || ca998 || Perfect || [[Team:UC Berkeley/Notebook/BX/BX159 | BX159]]
|-
|-
-
| BX160 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX160 | BX160]]
+
| BX160 || 2008-08-13 || bxa80L || Clone #1 || ca998 || Good, need reverse read || [[Team:UC Berkeley/Notebook/BX/BX160F | BX160F]]
|-
|-
-
| BX161 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX161 | BX161]]
+
| BX161 || 2008-08-13 || bxa80R || Clone #1 || ca998 || Good, need reverse read || [[Team:UC Berkeley/Notebook/BX/BX161F | BX161F]]
|-
|-
-
| BX162 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX162 | BX162]]
+
| BX162 || 2008-08-13 || bxa31 || Clone #1 || ca998 || Good || [[Team:UC Berkeley/Notebook/BX/BX162 | BX162]]
|-
|-
-
| BX163 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX163 | BX163]]
+
| BX163 || 2008-08-13 || bxa31 || Clone #2 || ca998 || Perfect || [[Team:UC Berkeley/Notebook/BX/BX163 | BX163]]
|-
|-
-
| BX164 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX164 | BX164]]
+
| BX164 || 2008-08-13 || bxa132 || Clone #1 || ca998 || Wrong, strange lefty part || [[Team:UC Berkeley/Notebook/BX/BX164 | BX164]]
|-
|-
-
| BX165 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX165 | BX165]]
+
| BX165 || 2008-08-13 || bxa36 || Clone #? || ca998 || Perfect || [[Team:UC Berkeley/Notebook/BX/BX165 | BX165]]
|-
|-
-
| BX166 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX166 | BX166]]
+
| BX166 || 2008-08-13 || bxa37 || Clone #? || ca998 || Perfect || [[Team:UC Berkeley/Notebook/BX/BX166 | BX166]]
|-
|-
-
| BX167 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX167 | BX167]]
+
| BX167 || 2008-08-13 || bxa35L || Clone #? || ca998 || Good || [[Team:UC Berkeley/Notebook/BX/BX167 | BX167]]
|-
|-
| BX168 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX168 | BX168]]
| BX168 || Date || Plasmid || Clone # || Oligo || Result || [[Team:UC Berkeley/Notebook/BX/BX168 | BX168]]

Revision as of 19:18, 14 August 2008

Contents


BX001-BX053

Read Date Plasmid Clone # Oligo Result File
BX001 2008-06-15 pBca1256-K112000 Clone #1 ca998 Bad read BX001
BX002 2008-06-15 pBca1256-K112001 Clone #1 ca998 Partial perfect - one point mutation BX002
BX003 2008-06-15 pBca1256-K112002 Clone #1 ca998 Parent vector BX003
BX004 2008-06-15 pBca1256-K112003 Clone #1 ca998 Perfect BX004
BX005 2008-06-15 pBca1256-K112004 Clone #1 ca998 Partial perfect - one point mutation BX005
BX006 2008-06-15 pBca1256-K112005 Clone #1 ca998 Perfect BX006
BX007 2008-06-15 pBca1256-K112006 Clone #1 ca998 Perfect BX007
BX008 2008-06-15 pBca1256-K112007 Clone #1 ca998 Perfect BX008
BX009 2008-06-15 pBca1256-K112008 Clone #1 ca998 Perfect BX009
BX010 2008-06-15 pBca1256-K112009 Clone #1 ca998 Perfect BX010
BX011 2008-06-15 pBca1256-K112010 Clone #1 ca998 Perfect BX011
BX012 2008-06-15 pBca1256-K112011 Clone #1 ca998 Perfect BX012
BX013 2008-06-15 pBca1256-K112012 Clone #1 ca998 Perfect BX013
BX014 2008-06-15 pBca1256-K112013 Clone #1 ca998 Bad read BX014
BX015 2008-06-15 pBca1256-K112014 Clone #1 ca998 Perfect BX015
BX016 2008-06-15 pBca1256-K112015 Clone #1 ca998 Partial perfect - one point mutation BX016
BX017 2008-06-15 pBca1256-K112016 Clone #1 ca998 Perfect BX017
BX018 2008-06-15 pBca1256-K112017 Clone #1 ca998 Perfect BX018
BX019 2008-06-18 pBca1256-K112000 Clone #2 ca998 Perfect BX019
BX020 2008-06-18 pBca1256-K112001 Clone #2 ca998 Parent vector BX020
BX021 2008-06-18 pBca1256-K112002 Clone #2 ca998 Perfect BX021
BX022 2008-06-18 pBca1256-K112004 Clone #2 ca998 Perfect BX022
BX023 2008-06-18 pBca1256-K112013 Clone #2 ca998 Bad read BX023
BX024 2008-06-18 pBca1256-K112015 Clone #2 ca998 Perfect BX024
BX025 2008-06-20 pBca1256-K112001 Clone #3 ca998 Perfect BX025
BX026 2008-06-20 pBca1256-K112013 Clone #3 ca998 Bad Read BX026
BX027 2008-06-22 pBca1256-K112013 Clone #4 ca998 Bad read BX027
BX028 2008-06-26 pBca1256-K112013 Clone #5 ca998 Perfect, possible lack of EcoRI site BX028
BX029 2008-06-26 pBca1256-K112013 Clone #6 ca998 Perfect BX029
BX030 2008-06-26 pBca1256-K112013 Clone #7 ca998 Perfect, possible lack of EcoRI site BX030
BX031 2008-07-16 pBca1256-K112701 Clone #? G00101 Bad read BX031
BX032 2008-07-16 pBca1256-K112703 Clone #? G00101 Bad read BX032
BX033 2008-07-16 pBca1256-K112704 Clone #? G00101 Bad read BX033
BX034 2008-07-16 pBca1256-K112705 Clone #? G00101 Bad read BX034
BX035 2008-07-16 pBca1256-K112706 Clone #? G00101 Bad read BX035
BX036 2008-07-16 pBca1256-K112710 Clone #? G00101 Bad read BX036
BX037 2008-07-16 pBca1256-K112711 Clone #? G00101 Bad read BX037
BX040 2008-07-19 pBca1256-K112701 Clone #? G00101 Perfect BX040
BX041 2008-07-19 pBca1256-K112703 Clone #? G00101 Perfect BX041
BX042 2008-07-19 pBca1256-K112704 Clone #? G00101 Perfect BX042
BX043 2008-07-19 pBca1256-K112705 Clone #? G00101 Perfect BX043
BX044 2008-07-19 pBca1256-K112706 Clone #? G00101 Perfect BX044
BX045 2008-07-19 pBca1256-K112707 Clone #? G00101 Perfect BX045
BX046 2008-07-19 pBca1256-K112708 Clone #? G00101 Perfect BX046
BX047 2008-07-19 pBca1256-K112709 Clone #? G00101 Perfect BX047
BX048 2008-07-19 pBca1256-K112710 Clone #? G00101 Perfect BX048
BX049 2008-07-19 pBca1256-K112711 Clone #? G00101 Perfect BX049
BX050 2008-07-23 bxa36 Clone #1 ca998 Perfect BX050
BX051 2008-07-23 bxa37 Clone #1 ca998 Perfect BX051
BX052 2008-07-23 bxa132 Clone #1 ca998 Wrong BX052
BX053 2008-07-23 bxa133 Clone #1 ca998 Perfect BX053

BX054-BX96

Read Date Plasmid Clone # Oligo Result File
BX054 2008-07-24 bxa132 Clone #2 ca998 Wrong BX054
BX055 2008-07-24 bxa132 Clone #3 ca998 Wrong BX055
BX056 2008-07-24 bxa10 Clone #? ca998 Wrong BX056
BX059 2008-07-26 pBca1256-K112011 Clone #? ca998 Perfect BX059
BX060 2008-07-26 bxa136 Clone #1 ca998 Wrong BX060
BX061 2008-07-26 bxa72 Clone #1 ca998 Perfect BX061
BX062 2008-07-26 bxa38 Clone #6 ca998 Perfect BX062
BX063 2008-07-26 bxa39 Clone #1 ca998 Bad read BX063
BX064 2008-07-26 bxa40 Clone #1 ca998 Bad read BX064
BX065 2008-07-26 bxa41 Clone #1 ca998 Bad read BX065
BX066 2008-07-26 bxa42 Clone #6 ca998 Wrong BX066
BX067 2008-07-26 bxa43 Clone #3 ca998 Bad read BX067
BX068 2008-07-26 bxa44 Clone #1 ca998 Bad read BX068
BX069 2008-07-26 bxa45 Clone #2 ca998 Bad read BX069
BX070 2008-07-26 bxa33 Clone #5 ca998 Perfect BX070
BX071 2008-07-26 bxa77 Clone #2 ca998 Wrong BX071
BX072 2008-07-26 bxa71 Clone #2 ca998 Perfect BX072
BX073 2008-07-26 pBjh1601CK-bxa149 Clone #1 ca998 Perfect BX073
BX074 2008-07-26 bxa149 Clone #1 ca998 Perfect BX074
BX075 2008-07-26 bxa136 Clone #3 ca998 Wrong, genomic DNA BX075
BX076 2008-07-26 bxa42 Clone #6 ca998 Perfect BX076
BX077 2008-07-26 bxa44 Clone #6 ca998 Wrong, genomic DNA BX077
BX078 2008-07-26 bxa45 Clone #6 ca998 Bad read BX078
BX079 2008-07-26 3.1 - A12 Clone #? ca998 Antiholin BX079
BX080 2008-07-26 3.1 - C2 Clone #? ca998 <xis! BX080
BX081 2008-07-28 bxa11 Clone #1 ca998 Genomic DNA BX081
BX082 2008-07-28 bxa39 Clone #1 ca998 Bad read BX082
BX083 2008-07-28 bxa40 Clone #2 ca998 Bad read BX083
BX084 2008-07-28 bxa45 Clone #2 ca998 Bad read BX084
BX085 2008-07-28 bxa77 Clone #1 ca998 Wrong BX085
BX086 2008-07-28 bxa129 Clone #1 ca998 Wrong BX086
BX087 2008-07-28 bxa131 Clone #2 ca998 Perfect BX087
BX088 2008-07-28 pBca1256-K112118 Clone #? ca998 Perfect BX088
BX089 2008-07-30 bxa35 Clone #1 ca998 Perfect BX089
BX090 2008-07-30 bxa54 Clone #1 ca998 Wrong BX090
BX091 2008-07-30 bxa63 Clone #1 ca998 Promoter Wrong BX091
BX092 2008-07-30 bxa65 Clone #3 ca998 Promoter Wrong BX092
BX093 2008-07-30 bxa73 Clone #1 ca998 Perfect BX093
BX094 2008-07-30 bxa74 Clone #1 ca998 Good, too long for one read BX094
BX095 2008-07-30 bxa75 Clone #1 ca998 Wrong BX095
BX096 2008-07-30 bxa76 Clone #2 ca998 Good, too long for one read BX096

BX097-BX139

Read Date Plasmid Clone # Oligo Result File
BX097 2008-08-03 bxa11 Clone #2 ca998 Mixed template BX097
BX098 2008-08-03 bxa32 Clone #3 ca998 Mixed template, matches somewhat BX098
BX099 2008-08-03 bxa77 Clone #1 ca998 Bad read/mixed template BX099
BX100 2008-08-03 bxa77 Clone #2 ca998 Mixed template BX100
BX101 2008-08-03 bxa78 Clone #1 ca998 Good, bad read data at base 424 BX101
BX102 2008-08-03 bxa78 Clone #3 ca998 Good BX102
BX103 2008-08-03 bxa54 Clone #5 ca998 Mixed template BX103
BX104 2008-08-03 bxa54 Clone #5 g00101 Mixed template BX104
BX105 2008-08-03 bxa54 Clone #6 ca998 Mixed template BX105
BX106 2008-08-03 bxa54 Clone #6 g00101 Mixed template BX106
BX107 2008-08-03 bxa75 Clone #2 ca998 Perfect BX107
BX108 2008-08-03 bxa39 Clone #1 ca998 Mixed template BX108
BX109 2008-08-03 bxa40 Clone #2 ca998 Mixed template BX109
BX110 2008-08-03 bxa41 Clone #5 ca998 Mixed template BX110
BX111 2008-08-03 bxa43 Clone #4 ca998 Mixed template BX111
BX112 2008-08-03 bxa44 Clone #2 ca998 Mixed template BX112
BX113 2008-08-03 bxa45 Clone #2 ca998 Mixed template BX113
BX114 2008-08-05 bxa17 From Stock ca998 Perfect BX114
BX115 2008-08-05 bxa21 From Stock ca998 Perfect BX115
BX116 2008-08-05 bxa22 From Stock ca998 Pcon-B5 BX116
BX117 2008-08-05 bxa23 From Stock ca998 Perfect BX117
BX118 2008-08-05 bxa27 From Stock ca998 Perfect BX118
BX119 2008-08-06 bxa150 Clone #1 ca998 Perfect BX119
BX120 2008-08-06 bxa150 Clone #2 ca998 Perfect BX120
BX121 2008-08-06 bxa151 Clone #1 ca998 Perfect BX121
BX122 2008-08-06 bxa151 Clone #2 ca998 Perfect BX122
BX123 2008-08-06 bxa128 Clone #2 ca998 Perfect BX123
BX124 2008-08-06 bxa95 Clone #1 ca998 Lacking bxa54 BX124
BX125 2008-08-06 bxa95 Clone #2 ca998 Lacking bxa54 BX125
BX126 2008-08-06 bxa96 Clone #1 ca998 Lacking bxa54 BX126
BX127 2008-08-06 bxa96 Clone #2 ca998 Lacking bxa54 BX127
BX128 2008-08-07 bxa25 Clone #1 ca998 Perfect BX128
BX129 2008-08-07 bxa25 Clone #2 ca998 Perfect BX129
BX130 2008-08-07 Pcon-C5 Clone #? ca998 Perfect BX130
BX131 2008-08-07 Pcon-G6 Clone #? ca998 Perfect BX131
BX132 2008-08-07 Pcon Clone #? ca998 Perfect BX132
BX133 2008-08-07 bxa6 Clone #? ca998 Wrong, random insert BX133
BX134 2008-08-07 bxa7 Clone #? ca998 Wrong, random insert BX134
BX135 2008-08-07 bxa8 Clone #? ca998 Wrong, random insert BX135
BX136 2008-08-08 bxa6 Clone #1 ca998 Bad read, mixed template BX136
BX137 2008-08-08 bxa7 Clone #2 ca998 Bad read, mixed template BX137
BX138 2008-08-08 bxa8 Clone #1 ca998 Bad read, mixed template BX138
BX139 2008-08-08 bxa22 Clone #1 ca998 Perfect BX139

BX140-BX189

Read Date Plasmid Clone # Oligo Result File
BX140 2008-08-09 bxa6 Clone #2 ca998 Perfect BX140
BX141 2008-08-09 bxa7 Clone #1 ca998 Perfect BX141
BX142 2008-08-09 bxa153 Clone #1 ca998 missing lysozyme.holin.term BX142
BX143 2008-08-09 bxa77 Clone #1 ca998 sequencd as Pcon-B5 BX143
BX144 2008-08-09 bxa54 Clone #1 ca998 bxa31 is bad BX144
BX144R 2008-08-09 bxa54 Clone #1 g00101 reverse is ok BX144R
BX145 2008-08-09 bxa31 Clone #? ca998 need to redo bxa31 BX145
BX146 2008-08-09 bxa9 Clone #? ca998 Pspv2 has a point mutation BX146
BX147 2008-08-11 bxa35 Clone #? ca998 Perfect BX147
BX148 2008-08-11 bxa50 Clone #7 ca998 Didn't assemble BX148
BX148R 2008-08-11 bxa50 Clone #7 g00101 Didn't assemble BX148R
BX149 2008-08-11 bxa50 Clone #8 ca998 Didn't assemble BX149
BX149R 2008-08-11 bxa50 Clone #8 g00101 Didn't assemble BX149R
BX150 2008-08-11 bxa153 Clone #2 ca998 Didn't assemble BX150
BX151 2008-08-11 bxa153 Clone #3 ca998 Didn't assemble BX151
BX152 2008-08-11 bxa39 Clone #1 ca998 Didn't assemble BX152
BX153 2008-08-12 bxa8 Clone #3 ca998 No read data BX153
BX154 2008-08-12 bxa8 Clone #4 ca998 No read data BX154
BX155 2008-08-12 bxa8 Clone #5 ca998 No read data BX155
BX156 2008-08-13 bxa39 Clone #3 ca998 Perfect BX156
BX157 2008-08-13 bxa40 Clone #1 ca998 Perfect BX157
BX158 2008-08-13 bxa43 Clone #1 ca998 Perfect BX158
BX159 2008-08-13 bxa44 Clone #2 ca998 Perfect BX159
BX160 2008-08-13 bxa80L Clone #1 ca998 Good, need reverse read BX160F
BX161 2008-08-13 bxa80R Clone #1 ca998 Good, need reverse read BX161F
BX162 2008-08-13 bxa31 Clone #1 ca998 Good BX162
BX163 2008-08-13 bxa31 Clone #2 ca998 Perfect BX163
BX164 2008-08-13 bxa132 Clone #1 ca998 Wrong, strange lefty part BX164
BX165 2008-08-13 bxa36 Clone #? ca998 Perfect BX165
BX166 2008-08-13 bxa37 Clone #? ca998 Perfect BX166
BX167 2008-08-13 bxa35L Clone #? ca998 Good BX167
BX168 Date Plasmid Clone # Oligo Result BX168
BX169 Date Plasmid Clone # Oligo Result BX169
BX170 Date Plasmid Clone # Oligo Result BX170
BX171 Date Plasmid Clone # Oligo Result BX171
BX172 Date Plasmid Clone # Oligo Result BX172
BX173 Date Plasmid Clone # Oligo Result BX173
BX174 Date Plasmid Clone # Oligo Result BX174
BX175 Date Plasmid Clone # Oligo Result BX175
BX176 Date Plasmid Clone # Oligo Result BX176
BX177 Date Plasmid Clone # Oligo Result BX177
BX178 Date Plasmid Clone # Oligo Result BX178
BX179 Date Plasmid Clone # Oligo Result BX179
BX180 Date Plasmid Clone # Oligo Result BX180
BX181 Date Plasmid Clone # Oligo Result BX181
BX182 Date Plasmid Clone # Oligo Result BX182
BX183 Date Plasmid Clone # Oligo Result BX183
BX184 Date Plasmid Clone # Oligo Result BX184
BX185 Date Plasmid Clone # Oligo Result BX185
BX186 Date Plasmid Clone # Oligo Result BX186
BX187 Date Plasmid Clone # Oligo Result BX187
BX188 Date Plasmid Clone # Oligo Result BX188
BX189 Date Plasmid Clone # Oligo Result BX189


Bing Xia
Back to Berkeley
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