Team:Hawaii/Test Competent E. Coli

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* Next time, remember to aliquot out and transform only 50 ul of the competent cells.
* Next time, remember to aliquot out and transform only 50 ul of the competent cells.
* Number of transformants do not appear to differ between cells grown to OD600=0.3 and OD600=0.6 prior to induction of chemical competency
* Number of transformants do not appear to differ between cells grown to OD600=0.3 and OD600=0.6 prior to induction of chemical competency
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* Callahan lab cells appear more competent. Did he start with more competent cells (higher cell density)? Does exponential growth of E. coli seed stocks at 23C (Callahan cells, recommended protocol) result in higher competency than growth of E. coli at 37C (our cells)?
+
* Callahan lab cells appear 10 times more competent. Did he start with more competent cells (higher cell density)? Does exponential growth of E. coli seed stocks at 23C (Callahan cells, recommended protocol) result in higher competency than growth of E. coli at 37C (our cells)?
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Revision as of 02:18, 5 June 2008

Contents

Test Competent E. coli DH5a

  • Test our competent cells against Callahan competent cells

Methods

Materials

  • Transported 50uL of competent cells from Callahan Lab on ice
  • 100uL batch 1 competent cells made at OD600 ~0.6 (split into two 50 uL aliquots 4-18a,4-18b)
  • 100uL batch 2 competent cells made at OD600 ~0.3 (split into two 50 uL aliquots 2-17a,2-17b)

Procedure

  1. Thaw plasmid on ice
  2. Add 1uL plasmid pBluescript
  3. Incubate plasmid + competent cells on ice for 30 minutes
  4. Heat shock 60 sec at 42C
  5. Add 250 μl SOC
  6. Incubate at 37 C for 1 hour in 2 ml eppendorf tubes, with shaking (150 rpm)
  7. Plate 20 uL dilutions 1/1, 1/10, 1/100 on LB+amp to test competency

Results

Colony Count of pBluescript Transformants
Source DH5-α Dilution Colony Forming Units on Plate Number of Transformed Cells per mL
Callahan lab 1:1 Too many to count n/a
Callahan lab 1:10 Too many to count n/a
Callahan lab 1:100 2011,005,000
2-17 (OD600=0.3)1:1Too many to countn/a
2-17 (OD600=0.3)1:10 334 167,000
2-17 (OD600=0.3)1:100 17 [1] 85,000
4-18 (OD600=0.6) 1:1 Too many to countn/a
4-18 (OD600=0.6) 1:10 352 [2]176,000
4-18 (OD600=0.6) 1:100 40200,000
4-17 (OD600=0.6)1:1 (negative control)00
2-15 (OD600=0.3)1:1 (negative control)00
4-17 (OD600=0.6)1:1 (positive control [3]) Bacterial lawnn/a
2-15 (OD600=0.3)1:1 (positive control [3]) Bacterial lawnn/a

Notes:
1 Fewer than 30 colonies results in a statistically inaccurate estimation of cell density. CFU should be between 30 and 300.
2 Colonies formed in one quadrant (88) were counted and multiplied by 4 to give final cell density.
3 Positive control was plated on plain LB plates, without amp.

Discussion

  • Next time, remember to aliquot out and transform only 50 ul of the competent cells.
  • Number of transformants do not appear to differ between cells grown to OD600=0.3 and OD600=0.6 prior to induction of chemical competency
  • Callahan lab cells appear 10 times more competent. Did he start with more competent cells (higher cell density)? Does exponential growth of E. coli seed stocks at 23C (Callahan cells, recommended protocol) result in higher competency than growth of E. coli at 37C (our cells)?


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