Team:Warsaw/Calendar-Main/7 July 2008
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<p>'''Preparation of constructs with OmpA protein fusions''' <br> | <p>'''Preparation of constructs with OmpA protein fusions''' <br> | ||
- | 1. | + | 1. Digestion of confirmed clones of pET15b+OmpA_alpha and pET15b+OmpA_omega with NdeI and BamHI<br> |
- | 2. | + | 2. Digestion of pACYC177 plasmid with NdeI and BamHI, dephosphorylation with CIAP<br> |
3. Gel electrophoresis and digested plasmids and gel-out of proper bands <br> | 3. Gel electrophoresis and digested plasmids and gel-out of proper bands <br> | ||
4. Overnight ligation of pACYC177 and OmpA_alpha<br> | 4. Overnight ligation of pACYC177 and OmpA_alpha<br> | ||
5. Overnight ligation of pACYC177 and OmpA_omega | 5. Overnight ligation of pACYC177 and OmpA_omega | ||
</p> | </p> | ||
+ | <p>'''Preparation of construct pKS with A protein''' <br> | ||
+ | 1. Gradient PCR:<br> | ||
+ | template DNA pDRIVE-TAPtag - 1 µl<br> | ||
+ | primer APNot - 2 µl<br> | ||
+ | primer ALSac - 2µl<br> | ||
+ | Pfu buffer with Mg2+ - 5 µl<br> | ||
+ | 10 mM dNTPs - 1 µl<br> | ||
+ | Pfu Turbo polymerase - 0,5 µl<br> | ||
+ | H2O - 38,5 µl<br> | ||
+ | <br> | ||
+ | Program:<br> | ||
+ | 1. 94°C, 3 min<br> | ||
+ | 2. 94°C, 30 sec<br> | ||
+ | 3. 62°C, 45 sec<br> | ||
+ | 4. 72°C, 45 sec<br> | ||
+ | 5. Repeat of elongation step 25X<br> | ||
+ | 6. 72°C, 10 min<br> | ||
+ | 7. Hold at 4 °C<br> | ||
+ | <br> | ||
+ | 2. Gel electrophoresis of PCR product<br> | ||
+ | 3. Isolation of proper band (470bp) from the gel<br> | ||
+ | 4. Overnight digestion of isolated PCR product with NotI and SacI | ||
- | + | </p> | |
- | + | ||
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Revision as of 17:52, 26 September 2008