Team:Warsaw/Calendar-Main/15 July 2008

From 2008.igem.org

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<li>gel electrophoresis
<li>gel electrophoresis
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<h3><a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#pcl">Polymerase Chain Ligation</a> on linker-A and omega-linker</h3>
<h3><a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#pcl">Polymerase Chain Ligation</a> on linker-A and omega-linker</h3>
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<h3>Preparation of constructs with OmpA protein fusions and Cloning of protein Z DNA to OmpA constructs</h3>
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<li> <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#plasmid_DNA_isolation">Isolation of plasmids</a> from cultures inocluated on previous day (pCACYC177 + OmpA_alpha and pACYC177+OmpA_Z_omega). </li>
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<li> Control
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<a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#digest">digest</a> of isolated plasmids with BamHI and SacI (we found good clones for both ligations).</li>
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Revision as of 16:56, 11 October 2008

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Cloning of protein Z DNA to OmpA constructs

Michał K.

Two colonies was inoculated to liquid LB broth with kanamycin.

Preparation of alfa+A conctruct

Antoni

  1. Gradient PCR on alpha+A
  2. PCR with gradient of DMSO on alpha+A
  3. gel electrophoresis

Polymerase Chain Ligation on linker-A and omega-linker

Michał L., Ewa, Marcin

  • reisolated PCR product omega-linker - 4 µl
  • reisolated PCR product linker-A - 13.5 µl
  • primer OmegaL+SacI_N - 2 µl
  • primer AP+NotI_N - 2 µl
  • Pfu buffer with Mg2+ - 5 µl
  • dNTPs - 1 µl
  • H2o - 22 µl
  • Program:
    1. 95°C - 3'
    2. 95°C - 30"
    3. 55°C - 45"
    4. 68°C - 1'
    5. go to step 2 25 x
    6. 68° - 10'
    7. keep in 4°
  • gel electrophoresis of products