Team:Warsaw/Calendar-Main/21 May 2008

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<html><h3>Preparation of <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pMPM-T5%2BAID%2BT7>pMPMT5-AID+T7</a> and <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pMPM-T5%2BAIDT7>pMPMT5+AID-T7</a></h3>
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<h4>Michał K.</h4>
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<p><ol>
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<li> Inoculation of separate transformant colonies for <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pMPM-T5%2BAID%2BT7>transcriptional fusion</a> (liquid LB + tetracycline).</li>
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<li> Inoculation of separate transformant colonies for <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pMPM-T5%2BAIDT7>translational fusion</a> (liquid LB + tetracycline). </li>
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</ol></p>
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<p>Michał K: <br>
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<h3> Rifampicin test #1</h3>
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1. PCR - transcription fusion: AID + T7 RNA-polymerase - optimalization (temperature gradient 60&deg;C - 80&deg;C).</p>
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<h4>Michał L., Ewa, Marcin</h4>
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<p>Primers: </p>
 
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<p><html>
 
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<a href="https://2008.igem.org/Wiki/Team:Warsaw/primers#AIDlNrH">AIDlNrH</a> and
 
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<a href="https://2008.igem.org/Wiki/Team:Warsaw/primers#T7pXbSal">T7pXbSal</a></html></p>
 
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Template DNA: AID for translation fusion and T7 RNA-polymerase for translation fusion <br>
 
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Annealing time: 4 minutes <br>
 
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35 cycles <br>
 
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2. Gel electrophoresis. <br>
 
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<table id="result">
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<tr><th>Strain</th><th>Inducer / repressor</th><th>Number of colonies on rifampicin</th></tr>
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<tr><th><a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">Top10</a></th><td>none</td><td>12</td></tr>
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<tr><th><a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">Top10</a></th><td>0.5 mM IPTG</td><td>17</td></tr>
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<tr><th><a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">Top10</a> <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pMPM-T5-AID>pMPM-T5-AID</a></th><td>none</td><td>13</td></tr>
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<tr><th><a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">Top10</a> <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pMPM-T5-AID>pMPM-T5-AID</a></th><td>0.1% Glucose</td><td>18</td></tr>
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<tr><th><a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">Top10</a> <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pMPM-T5-AID>pMPM-T5-AID</a></th><td>0.1% Arabinose</td><td>54</td></tr>
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<tr><th><a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">Top10</a> <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pTrc99A-AID>pTrc99a-AID</a></th><td>none</td><td>14</td></tr>
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<tr><th><a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">Top10</a> <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pTrc99A-AID>pTrc99a-AID</a></th><td>1% Glucose</td><td>17</td></tr>
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<tr><th><a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">Top10</a> <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pTrc99A-AID>pTrc99a-AID</a></th><td>0.5 mM IPTG</td><td>53</td></tr>
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</table>
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<br/>
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<p>Conclusion: AID seems to work!</p>
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Latest revision as of 14:03, 26 October 2008

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Preparation of pMPMT5-AID+T7 and pMPMT5+AID-T7

Michał K.

  1. Inoculation of separate transformant colonies for transcriptional fusion (liquid LB + tetracycline).
  2. Inoculation of separate transformant colonies for translational fusion (liquid LB + tetracycline).

Rifampicin test #1

Michał L., Ewa, Marcin

StrainInducer / repressorNumber of colonies on rifampicin
Top10none12
Top100.5 mM IPTG17
Top10 pMPM-T5-AIDnone13
Top10 pMPM-T5-AID0.1% Glucose18
Top10 pMPM-T5-AID0.1% Arabinose54
Top10 pTrc99a-AIDnone14
Top10 pTrc99a-AID1% Glucose17
Top10 pTrc99a-AID0.5 mM IPTG53

Conclusion: AID seems to work!