Template:Team:UC Berkeley/Notebook/AL sequencing

From 2008.igem.org

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| AL075 || 7-29-2008 || akl001 || Clone #1 || Oligo ca998 and g00101||Perfect || [[Team:UC Berkeley/Notebook/AL/AL075 | AL075]]
| AL075 || 7-29-2008 || akl001 || Clone #1 || Oligo ca998 and g00101||Perfect || [[Team:UC Berkeley/Notebook/AL/AL075 | AL075]]
|-
|-
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| AL076 || 7-28-2008 || || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL076 | AL076]]
+
| AL076 || 7-28-2008 || akl013 || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL076 | AL076]]
|-
|-
-
| AL077 || 7-27-2008 || || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL077 | AL077]]
+
| AL077 || 7-27-2008 || ig31 || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL077 | AL077]]
|-
|-
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| AL078 || 7-29-2008 || || || Oligo ca998 and G00101|| Mixed Inserts || [[Team:UC Berkeley/Notebook/AL/AL078 | AL078]]
+
| AL078 || 7-29-2008 || akl003 || || Oligo ca998 and G00101|| Mixed Inserts || [[Team:UC Berkeley/Notebook/AL/AL078 | AL078]]
|-
|-
-
| AL079 || 7-31-2008 || || || Oligo ca998 and G00101|| Mixed inserts || [[Team:UC Berkeley/Notebook/AL/AL079 | AL079]]
+
| AL079 || 7-31-2008 || akl005 || || Oligo ca998 and G00101|| Mixed inserts || [[Team:UC Berkeley/Notebook/AL/AL079 | AL079]]
|-
|-
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| AL080 || 7-31-2008 || || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL080 | AL080]]
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| AL080 || 7-31-2008 || akl003 || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL080 | AL080]]
 +
|-
 +
| AL081 || 7-31-2008 || akl005 || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL081 | AL081]]
|-
|-
| AL082 || 8-1-2008 || || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL082 | AL082]]
| AL082 || 8-1-2008 || || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL082 | AL082]]

Revision as of 09:49, 29 October 2008

[http://andersonlab.qb3.berkeley.edu/SeqLogTemplate.xls Excel Template for Sequencing Logs]

Read Date plasmid Clone Oligo Result File
AL001 6-16-2008 pBca1256-K112300 Clone #1 Oligo ca998 Perfect AL001
AL002 6-16-2008 pBca1256-K112301 Clone #1 Oligo ca998 Perfect AL002
AL003 6-16-2008 pBca1256-K112302 Clone #1 Oligo ca998 Perfect AL003
AL004 6-16-2008 pBca1256-K112303 Clone #1 Oligo ca998 Point Mutation AL004
AL005 6-16-2008 pBca1256-K112304 Clone #1 Oligo ca998 Perfect AL005
AL006 6-16-2008 pBca1256-K112305 Clone #1 Oligo ca998 Bad Read AL006
AL007 6-16-2008 pBca1256-K112306 Clone #1 Oligo ca998 Perfect AL007
AL008 6-16-2008 pBca1256-K112307 Clone #1 Oligo ca998 Point Mutation AL008
AL009 6-16-2008 pBca1256-K112308 Clone #1 Oligo ca998 Perfect AL009
AL010 6-16-2008 pBca1256-K112309 Clone #1 Oligo ca998 Perfect AL010
AL011 6-16-2008 pBca1256-K112310 Clone #1 Oligo ca998 Point Mutation AL011
AL012 6-16-2008 pBca1256-K112311 Clone #1 Oligo ca998 Bad Read AL012
AL013 6-16-2008 pBca1256-K112312 Clone #1 Oligo ca998 Perfect AL013
AL014 6-16-2008 pBca1256-K112313 Clone #1 Oligo ca998 Point Mutation AL014
AL015 6-16-2008 pBca1256-K112314 Clone #1 Oligo ca998 Other sequence AL015
AL016 6-16-2008 pBca1256-K112315 Clone #1 Oligo ca998 Perfect AL016
AL017 6-16-2008 pBca1256-K112316 Clone #1 Oligo ca998 Bad Read AL017
AL018 6-16-2008 pBca1256-K112317 Clone #1 Oligo ca998 Perfect AL018
AL019 6-16-2008 pBca1256-K112318 Clone #1 Oligo ca998 Perfect AL019
AL020 6-16-2008 pBca1256-K112319 Clone #1 Oligo ca998 Other Sequence AL020
AL021 6-16-2008 pBca1256-K112320 Clone #1 Oligo ca998 Short Read/Point Mutation AL021
AL022 6-18-2008 pBca1256-K112303 Clone #2 Oligo ca998 Perfect AL022
AL023 6-18-2008 pBca1256-K112305 Clone #2 Oligo ca998 Other sequence AL023
AL024 6-18-2008 pBca1256-K112307 Clone #2 Oligo ca998 Perfect AL024
AL025 6-18-2008 pBca1256-K112310 Clone #2 Oligo ca998 Other Sequence AL025
AL026 6-18-2008 pBca1256-K112311 Clone #2 Oligo ca998 Other Sequence AL026
AL027 6-18-2008 pBca1256-K112313 Clone #2 Oligo ca998 Other Sequence AL027
AL028 6-18-2008 pBca1256-K112314 Clone #2 Oligo ca998 Perfect AL028
AL029 6-18-2008 pBca1256-K112316 Clone #2 Oligo ca998 Other Sequence AL029
AL030 6-18-2008 pBca1256-K112319 Clone #2 Oligo ca998 Perfect AL030
AL031 6-18-2008 pBca1256-K112320 Clone #2 Oligo ca998 Perfect AL031
AL032 6-20-2008 pBca1256-K112305 Clone #3 Oligo ca998 Perfect AL032
AL033 6-20-2008 pBca1256-K112310 Clone #3 Oligo ca998 Perfect AL033
AL034 6-20-2008 pBca1256-K112311 Clone #3 Oligo ca998 Point Mutation and Deletion AL034
AL035 6-20-2008 pBca1256-K112313 Clone #3 Oligo ca998 Point Mutation AL035
AL036 6-20-2008 pBca1256-K112316 Clone #3 Oligo ca998 Other Sequence AL036
AL037 6-24-2008 pBca1256-K112311 Clone #4 Oligo ca998 Point Mutation AL037
AL038 6-24-2008 pBca1256-K112313 Clone #4 Oligo ca998 Perfect AL038
AL039 6-24-2008 pBca1256-K112316 Clone #4 Oligo ca998 Point mutation in EcoRI site AL039
AL040 6-24-2008 pBca1256-K112319 Clone #1 Oligo ca998 Perfect AL040
AL041 6-24-2008 pBca1256-K112319 Clone #2 Oligo ca998 Perfect AL041
AL042 6-26-2008 pBca1256-K112311 Clone #5 Oligo ca998 Deletion and point mutation AL042
AL043 6-26-2008 pBca1256-K112311 Clone #6 Oligo ca998 Deletion AL043
AL044 6-27-2008 pBca1256-K112311 Clone #7 Oligo ca998 Deletion AL044
AL045 6-29-2008 pBca1256-K112311 Clone #8 Oligo ca998 Perfect AL045
AL046 6-29-2008 pBca1256-K112311 Clone #9 Oligo ca998 Perfect AL046
AL047 6-29-2008 pBca1256-K112311 Clone #10 Oligo ca998 Did not work AL047
AL048 7-06-2008 K112321 Clone #1 Oligo ca998 Did not work AL048
AL049 7-06-2008 K112321 Clone #2 Oligo ca998 Point Mutation in C-terminus AL049
AL050 7-06-2008 K112322 Clone #1 Oligo ca998 Perfect AL050
AL051 7-06-2008 K112322 Clone #2 Oligo ca998 Perfect AL051
AL052 Jin's Sequence Oligo ca998 AL052
AL053 Jin's Sequence Oligo ca998 AL053
AL054 7-12-2008 K112323 Clone #1 Oligo ca998 Some Deletions/Point Mutation Possibly from sequencing AL054
AL055 7-12-2008 K112323 Clone #2 Oligo ca998 Perfect AL055
AL056 7-22-2008 K112319 Clone #3 Oligo ca998 Turn out to be ftsAz AL056
AL057 7-19-2008 akl004 Clone #1 Oligo ca998 Lefty is a~pelB AL057
AL058 7-19-2008 Clone #1 Oligo ca998 and g00101 Lefty is a~pelB AL058
AL059 7-22-2008 akl008 Clone #1 Oligo ca998 no lefty part AL059
AL060 7-22-2008 akl007 Clone #1 Oligo ca998 wrong K112607 AL060
AL061 7-22-2008 akl010 Clone #1 Oligo ca998 wrong K112607 AL061
AL062 7-22-2008 Bca1092 A/K Clone #1 Oligo ca998 Perfect AL062
AL063 7-23-2008 K112230 A/K Clone #1 Oligo ca998 Sequence is a~pelB AL063
AL064 7-23-2008 K112608 Clone #1 Oligo ca998 Perfect (but not what we want) AL064
AL065 7-24-2008 Bca1109 Clone #1 Oligo ca998 Some Mutations but should still work AL065
AL066 7-24-2008 pBCa1256-K112229 Clone #1 Oligo ca998 Perfect AL066
AL067 7-25-2008 akl005 Clone #1 Oligo ca998 Multiple Templates AL067
AL068 7-24-2008 akl009 Clone #1 Oligo ca998 Wrong rbs_lamB> righty could be rbs pelB AL068
AL069 7-25-2008 Bca1106-A K/C Clone #1 Oligo ca998 Bad Read AL069
AL070 7-24-2008 akl008 Clone #2 Oligo ca998 {rbs_lamB>} wrong AL070
AL071 7-25-2008 Bca1109 Clone #1 Oligo g00101 Perfect AL071
AL072 7-25-2008 pBca1256-K112319 Clone #4 Oligo ca998 Perfect AL072
AL073 7-25-2008 akl002 Clone #1 Oligo ca998 Perfect AL073
AL074 7-26-2008 akl005 Clone #2 Oligo ca998 and g00101Multiple Templates AL074
AL075 7-29-2008 akl001 Clone #1 Oligo ca998 and g00101Perfect AL075
AL076 7-28-2008 akl013 Oligo ca998 AL076
AL077 7-27-2008 ig31 Oligo ca998 AL077
AL078 7-29-2008 akl003 Oligo ca998 and G00101 Mixed Inserts AL078
AL079 7-31-2008 akl005 Oligo ca998 and G00101 Mixed inserts AL079
AL080 7-31-2008 akl003 Oligo ca998 AL080
AL081 7-31-2008 akl005 Oligo ca998 AL081
AL082 8-1-2008 Oligo ca998 AL082
AL083 8-1-2008 Oligo ca998 AL083
AL084 8-1-2008 Oligo ca998 AL084
AL085 8-1-2008 Oligo ca998 AL085
AL086 8-1-2008 Oligo ca998 AL086
AL087 8-5-2008 ihfA Oligo ca998 Perfect AL087
AL088 8-5-2008 Bca1091 AC Oligo ca998 Did not work AL088
AL089 8-1-2008 K112121 CA Oligo ca998 Perfect AL089
AL090 8-5-2008 Bca1112 KA Oligo ca998 AL090
AL091 8-5-2008 I716211 AK Oligo ca998 Did not work AL091
AL092 8-1-2008 K112232 KC Oligo ca998 Perfect AL092
AL093 8-2-2008 Oligo ca998 AL093
AL094 8-2-2008 Oligo ca998 AL094
AL095 8-2-2008 Oligo ca998 AL095
AL096 8-6-2008 I716211 AK Oligo ca998 Did not work AL096
AL097 8-5-2008 akl004 Oligo ca998 Perfect AL097
AL098 8-5-2008 akl006 Oligo ca998 Perfect AL098
AL099 8-5-2008 akl007 Oligo ca998 Missing righty AL099
AL100 8-5-2008 akl008 Oligo ca998 Perfect AL100
AL101 8-5-2008 akl009 Oligo ca998 Perfect AL101
AL102 8-5-2008 akl010 Oligo ca998 Perfect AL102
AL103 8-5-2008 pBca9145-akl071 Oligo ca998 Wrong Sequence AL103
AL104 8-5-2008 pBca9145-akl072 Oligo ca998 Wrong Sequence AL104
AL105 8-5-2008 akl069 Oligo ca998 Perfect AL105
AL106 8-6-2008 akl019 Oligo ca998 Perfect AL106
AL107 8-6-2008 akl003 Oligo ca998 Did not work AL107
AL108 8-6-2008 akl005 Oligo ca998 Did not work AL108
AL109 8-8-2008 akl018 Oligo ca998 Wrong AL109
AL110 8-8-2008 akl070 Clone#1 Oligo ca998 Wrong AL110
AL111 8-10-2008 akl070 Clone#2 Oligo ca998 Perfect AL111
AL112 8-10-2008 akl043 Oligo ca998 Wrong Sequence AL112
AL113 8-10-2008 akl056 Oligo ca998 Did not work AL113
AL114 8-10-2008 akl057 Oligo ca998 Wrong Sequence AL114
AL115 8-12-2008 pBca1256-I716211 Clone#1(stock plate) Oligo ca998 Perfect AL115
AL116 8-16-2008 akl071 Clone#1 Oligo ca998 deletion of righty AL116
AL117 8-16-2008 akl071 Clone#2 Oligo ca998 deletion of lefty AL117
AL118 8-16-2008 akl072 Clone#1 Oligo ca998 deletion of righty AL118
AL119 8-16-2008 akl072 Clone#2 Oligo ca998 delection of righty AL119
AL120 8-17-2008 akl074 Clone#1 Oligo ca998 hairpin AL120
AL121 8-17-2008 akl074 Clone#2 Oligo ca998 hairpin AL121
AL122 8-19-2008 bjh1230-2 Clone#1 Oligo ca998 Perfect AL122
AL123 8-19-2008 bjh1231-2 Clone#1 Oligo ca998 Perfect AL123
AL124 8-19-2008 bjh1232-2 CLone#1 Oligo ca998 Perfect AL124
AL125 8-24-2008 akl007 Clone#1(AL28-A1) Oligo ca998 Perfect AL125
AL126 8-24-2008 akl007 Clone#2(AL28-A2) Oligo ca998 Perfect AL126
AL127 8-26-2008 akl018 Clone # Oligo ca998 Perfect AL127
AL128 8-31-2008 akl005-2 Clone #2 Oligo ca998 and g00101 Perfect AL128
AL129 8-31-2008 akl005-3 Clone #3 Oligo ca998 and g00101 Perfect AL129
AL130 Oligo ca998 AL130
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