Team:HKUSTers/Meetings/July 9
From 2008.igem.org
(New page: ==General Info== From 6p.m. to 8:00p.m. Rm 5486 Attendance: Xiuye, Qing, Jinyu, Winnie, Carmen, Jiahui, Wisely, Jingjing, Sung Hoi, Gladys, Vivian and King. ==Contents== On last meetin...) |
|||
(One intermediate revision not shown) | |||
Line 1: | Line 1: | ||
+ | __NOTOC__ | ||
+ | <html> | ||
+ | <head> | ||
+ | <style> | ||
+ | |||
+ | .ideasList{ | ||
+ | margin-bottom:30px | ||
+ | } | ||
+ | |||
+ | ul#sub { | ||
+ | margin:0px; | ||
+ | padding:0px; | ||
+ | font-size:14px; | ||
+ | list-style-image:none; | ||
+ | list-style-type:none; | ||
+ | |||
+ | } | ||
+ | |||
+ | #sub li { margin-bottom:20px;} | ||
+ | |||
+ | } | ||
+ | |||
+ | #sub li a:hover { | ||
+ | text-decoration:none; | ||
+ | } | ||
+ | |||
+ | .links { | ||
+ | width:100%; | ||
+ | background-color:#1a2b8c; | ||
+ | margin-bottom:30px; | ||
+ | } | ||
+ | |||
+ | .links tr { | ||
+ | background-color: dodgerblue;; | ||
+ | } | ||
+ | |||
+ | |||
+ | } | ||
+ | |||
+ | |||
+ | .links a{ | ||
+ | text-decoration:none; | ||
+ | font-size:15pt; | ||
+ | font-weight:bold; | ||
+ | font:'helvetica'; | ||
+ | color: white; | ||
+ | } | ||
+ | |||
+ | .links a:active { | ||
+ | background-color:#1a2b8c; | ||
+ | } | ||
+ | |||
+ | } | ||
+ | |||
+ | #navactive { | ||
+ | background-color:dodgerblue; | ||
+ | } | ||
+ | |||
+ | |||
+ | #header { | ||
+ | width: 100%; | ||
+ | text-align: center; | ||
+ | } | ||
+ | |||
+ | h4 { | ||
+ | font-size: 14pt; | ||
+ | font-weight: normal; | ||
+ | } | ||
+ | |||
+ | dt { | ||
+ | font-size: 12pt; | ||
+ | } | ||
+ | |||
+ | #projectnav h4 { | ||
+ | padding: .4ex; | ||
+ | } | ||
+ | |||
+ | #projectnav dt { | ||
+ | font-weight: normal; | ||
+ | margin: 1.5ex 0 0 0; | ||
+ | } | ||
+ | |||
+ | #projectnav h4, #projectnav dt, #projectnav dd { | ||
+ | text-align: center; | ||
+ | text-indent: 0; | ||
+ | margin-left: 0; | ||
+ | } | ||
+ | |||
+ | #hbnav dd { | ||
+ | background-color: dodgerblue;; | ||
+ | border-left: dashed #FFF 3px; | ||
+ | border-right: dashed #FFF 3px; | ||
+ | padding: .8ex; | ||
+ | } | ||
+ | |||
+ | #denav dd{ | ||
+ | background-color: dodgerblue;; | ||
+ | border-left: dashed #FFF 3px; | ||
+ | border-right: dashed #FFF 3px; | ||
+ | padding: 1ex; | ||
+ | margin-top: 0; | ||
+ | } | ||
+ | |||
+ | #projectnav a { | ||
+ | color: dodgerblue; | ||
+ | } | ||
+ | |||
+ | #pagecontent p { | ||
+ | text-indent: 1.25em; | ||
+ | } | ||
+ | </style> | ||
+ | <! -- END of style sheet --> | ||
+ | |||
+ | </head> | ||
+ | <body> | ||
+ | |||
+ | <!-- Navigation Links Table--> | ||
+ | <table class="links" > | ||
+ | <tr> | ||
+ | <td align="center" ><a class="mainLinks" href="https://2008.igem.org/Team:HKUSTers" >Home</a> </td> | ||
+ | <td align="center"id="navactive" ><a class="mainLinks" href="https://2008.igem.org/Team:HKUSTers/Team" >The Team</a> </td> | ||
+ | <td align="center" ><a class="mainLinks" href="https://2008.igem.org/Team:HKUSTers/Project" >The Project</a> </td> | ||
+ | <td align="center" ><a class="mainLinks" href="https://2008.igem.org/Team:HKUSTers/Parts" >Parts</a> </td> | ||
+ | <td align="center" ><a class="mainLinks" href="https://2008.igem.org/Team:HKUSTers/Modelling">Modelling</a> </td> | ||
+ | <td align="center" ><a class="mainLinks" href="https://2008.igem.org/Team:HKUSTers/Notebook" >Notebook</a> </td> | ||
+ | <td align="center" ><a class="mainLinks" href="https://2008.igem.org/Team:HKUSTers/Gallery" >Gallery</a> </td> | ||
+ | </tr> | ||
+ | </table> | ||
+ | </html> | ||
+ | |||
+ | |||
+ | |||
==General Info== | ==General Info== | ||
From 6p.m. to 8:00p.m. | From 6p.m. to 8:00p.m. | ||
Line 22: | Line 154: | ||
- | + | "Strain & Vector for use" by Winnie and Jean. | |
In this method, problem existed for cI857 is a derivative of cI and may have interference with our randomizer circuit. | In this method, problem existed for cI857 is a derivative of cI and may have interference with our randomizer circuit. | ||
Line 30: | Line 162: | ||
OR2 designing come across with the problem that sequence of OR2 for cI and cI434 differs a lot from each other and minor changes in either these two sequences can not result in a OR2 having affinity for both cI and cI 434. King suggested a compromising model for overlapping edges of these two sequences and maintaining most of their integrities, therefore this overlapping OR2 has affinity for both cI and cI434. | OR2 designing come across with the problem that sequence of OR2 for cI and cI434 differs a lot from each other and minor changes in either these two sequences can not result in a OR2 having affinity for both cI and cI 434. King suggested a compromising model for overlapping edges of these two sequences and maintaining most of their integrities, therefore this overlapping OR2 has affinity for both cI and cI434. | ||
- | Jingjing pointed out that vicinity between OR1 (for 434) and OR2 (for cI) is needed for induction of Prm | + | Jingjing pointed out that vicinity between OR1 (for 434) and OR2 (for cI) is needed for induction of Prm "The OR2 problem". Whether Prm needs induction or not needs further investigation. |
Latest revision as of 05:04, 30 October 2008
Home | The Team | The Project | Parts | Modelling | Notebook | Gallery |
General Info
From 6p.m. to 8:00p.m.
Rm 5486
Attendance: Xiuye, Qing, Jinyu, Winnie, Carmen, Jiahui, Wisely, Jingjing, Sung Hoi, Gladys, Vivian and King.
Contents
On last meeting we divided our labor for Randomizer project:
- strain and vector (Winnie and Jean)
- design of OR1 and OR2 (Jingjing and Qing)
- reporter (xiuye)
- test of cI and cI434 (Cotton?) ~ parallel to the cloning
- UV test (Carmen?) ~ parallel to the cloning
- simulation (Jiahui and Wisely)
- measurement and observation (TBD)
This meeting saw Winnie & Jean’s study of vector & strain selection and Jingjing & Qing’s study into OR2 design:
"Strain & Vector for use" by Winnie and Jean.
In this method, problem existed for cI857 is a derivative of cI and may have interference with our randomizer circuit.
OR2 designing come across with the problem that sequence of OR2 for cI and cI434 differs a lot from each other and minor changes in either these two sequences can not result in a OR2 having affinity for both cI and cI 434. King suggested a compromising model for overlapping edges of these two sequences and maintaining most of their integrities, therefore this overlapping OR2 has affinity for both cI and cI434.
Jingjing pointed out that vicinity between OR1 (for 434) and OR2 (for cI) is needed for induction of Prm "The OR2 problem". Whether Prm needs induction or not needs further investigation.