Team:Chiba/Sender experiments/Senders(JW1908) T9002(JW1908)
From 2008.igem.org
(Difference between revisions)
(→Sender culture:10μL,Receiver culture:1000μL) |
(→Sender culture:500μL,Receiver culture:500μL) |
||
(17 intermediate revisions not shown) | |||
Line 21: | Line 21: | ||
===Reaction temparature:37°C,09/12=== | ===Reaction temparature:37°C,09/12=== | ||
====Sender culture:1000μL,Receiver culture:1000μL==== | ====Sender culture:1000μL,Receiver culture:1000μL==== | ||
- | [[Image:Chiba_talks_JW1908_37_RS1_0912_01.gif|thumb|left|'''Fig.1''' <br>12/09.E.coli strain,senders:JW1908,BBa_T9002:JW1908,Reaction temparature:37°C | + | [[Image:Chiba_talks_JW1908_37_RS1_0912_01.gif|thumb|left|'''Fig.1''' <br>12/09.E.coli strain,senders:JW1908,BBa_T9002:JW1908,Reaction temparature:37°C.All measurements are averages from three replicate cultures with error bars representing standard deviations.]] |
<br clear=all> | <br clear=all> | ||
====Sender culture:100μL,Receiver culture:1000μL==== | ====Sender culture:100μL,Receiver culture:1000μL==== | ||
- | [[Image:Chiba_talks_JW1908_37_RS2_0912_01.gif|thumb|left|'''Fig.2''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908, | + | [[Image:Chiba_talks_JW1908_37_RS2_0912_01.gif|thumb|left|'''Fig.2''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908,37°C.All measurements are averages from three replicate cultures with error bars representing standard deviations.]] |
<br clear=all> | <br clear=all> | ||
<br clear=all> | <br clear=all> | ||
- | + | *Fig. 1,Fig. 2 | |
- | + | *Results | |
- | + | **Green fluorescence intensity didn't increase in the culture containing BBa_K0840010(plac+CinI+LVA).We thought BBa_K084010 didn't work properly or LuxR gene didn't interact with signal molecules synthesized by BBa_K084010. | |
- | + | **Others responded at the same time(4 hours after induction).Final fluorescence intensity differd. | |
===Reaction temparature:37°C=== | ===Reaction temparature:37°C=== | ||
====Sender culture:500μLm,Receiver culture:500μL==== | ====Sender culture:500μLm,Receiver culture:500μL==== | ||
- | [[Image:Chiba_communication_JW1908_37_RS1_01.gif|thumb|left|'''Fig.3''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908,37°C]] | + | [[Image:Chiba_communication_JW1908_37_RS1_01.gif|thumb|left|'''Fig.3''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908,37°C.All measurements are averages from three replicate cultures with error bars representing standard deviations.]] |
- | [[Image:Chiba_talks_JW1908_37_RS1_02.gif|thumb|left|'''Fig.4''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908,37°C]] | + | [[Image:Chiba_talks_JW1908_37_RS1_02.gif|thumb|left|'''Fig.4''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908,37°C.All measurements are averages from three replicate cultures with error bars representing standard deviations.]] |
<br clear=all> | <br clear=all> | ||
- | + | *Fig. 3 | |
- | + | *Results | |
- | We thought AHL concentration was quickly reached the threshold concentration.The fluorescence intensity increased as gfp maturured. | + | **Response time and final fluorescence intensity showed no significant difference. |
+ | *Discussion | ||
+ | **We thought AHL concentration was quickly reached the threshold concentration.The fluorescence intensity increased as gfp maturured. | ||
- | + | *Fig. 4 | |
- | + | *Results | |
+ | **No significant difference in fluorescence intensity between the culture containing [http://partsregistry.org/Part:BBa_K084007 BBa_K084007](plac+RhlI) gene transformed cells and the culture containing [http://partsregistry.org/Part:BBa_K084008 BBa_K084008](plac+RhlI(LVA)) gene transformed cells. | ||
+ | *Discussion | ||
+ | **We thought that the rate of AHL synthesis by each autoinducer synthase was much faster than the rate of its degradation by protease. | ||
===Reaction temparature:30°C=== | ===Reaction temparature:30°C=== | ||
====Sender culture:500μL,Receiver culture:500μL==== | ====Sender culture:500μL,Receiver culture:500μL==== | ||
- | [[Image:Chiba_talks_JW1908_30_RS1_01.gif|thumb|left|'''Fig.5''' <br>E.coli strain,Senders:JW1908,BBa_T9002:JW1908, | + | [[Image:Chiba_talks_JW1908_30_RS1_01.gif|thumb|left|'''Fig.5''' <br>E.coli strain,Senders:JW1908,BBa_T9002:JW1908,30°C.All measurements are averages from three replicate cultures with error bars representing standard deviations.]] |
- | [[Image:Chiba_talks_JW1908_30_RS1_02.gif|thumb|left|'''Fig.6''' <br>E.coli strain,Senders:JW1908,BBa_T9002:JW1908, | + | [[Image:Chiba_talks_JW1908_30_RS1_02.gif|thumb|left|'''Fig.6''' <br>E.coli strain,Senders:JW1908,BBa_T9002:JW1908,30°C.All measurements are averages from three replicate cultures with error bars representing standard deviations.]] |
<br clear=all> | <br clear=all> | ||
- | + | *Fig. 6 | |
- | + | *Results | |
- | + | **No significant difference in fluorescence intensity between the cultures containing [http://partsregistry.org/Part:BBa_K084007 BBa_K084007](plac+RhlI) gene transformed cells and the culture containing [http://partsregistry.org/Part:BBa_K084008 BBa_K084008](plac+RhlI(LVA)) gene transformed cells. | |
- | + | *Discussion | |
- | + | **We thought that the rate of AHL synthesis by each autoinducer synthase was much faster than the rate of its degradation by protease. | |
====Sender culture:100μL,Receiver culture:1000μL==== | ====Sender culture:100μL,Receiver culture:1000μL==== | ||
- | [[Image:Chiba_talks_JW1908_30_RS2_01.gif|thumb|left|'''Fig.7''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908, | + | [[Image:Chiba_talks_JW1908_30_RS2_01.gif|thumb|left|'''Fig.7''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908,30°C.All measurements are averages from three replicate cultures with error bars representing standard deviations.]] |
- | [[Image:Chiba_talks_JW1908_30_RS2_02.gif|thumb|left|'''Fig.8''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908, | + | [[Image:Chiba_talks_JW1908_30_RS2_02.gif|thumb|left|'''Fig.8''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908,30°C.All measurements are averages from three replicate cultures with error bars representing standard deviations.]] |
- | + | ||
<br clear=all> | <br clear=all> | ||
- | + | *Fig.7 | |
- | + | *Results | |
- | + | **No significant difference in fluorescence intensity between the culture containing [http://partsregistry.org/Part:BBa_K084007 BBa_K084007](plac+RhlI) gene transformed cells and the culture containing [http://partsregistry.org/Part:BBa_K084008 BBa_K084008](plac+RhlI(LVA)) gene transformed cells. | |
+ | *Discussion | ||
+ | **We thought that the rate of AHL synthesis by each autoinducer synthase was much faster than the rate of its degradation by protease. | ||
====Sender culture:10μL,Receiver culture:1000μL==== | ====Sender culture:10μL,Receiver culture:1000μL==== | ||
- | [[Image:Chiba_talks_JW1908_30_RS3_02.gif|thumb|left|'''Fig.9''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908, | + | [[Image:Chiba_talks_JW1908_30_RS3_02.gif|thumb|left|'''Fig.9''' <br>E.coli strain,senders:JW1908,BBa_T9002:JW1908,30°C.All measurements are averages from three replicate cultures with error bars representing standard deviations.]] |
- | The final fluorescence intensity of the culture containing BBa_K084008 transformed cells which express LVA-tagged RhlI protein was lower than the culture containing cells which express untagged RhlI protein.It shows that LVA-tagged RhlI protein was degraded by LVA-specific protase.However,fluorescence intensity of both cultures increased at the same time.We thought it was because the AHL concentration was quickly reached the threshold concentration and cells began to express gfp.After 2 hours,fluorescence intensity started to increase. | + | <br clear=all> |
- | + | *Fig.9 | |
+ | *Results | ||
+ | **The final fluorescence intensity of the culture containing [http://partsregistry.org/Part:BBa_K084008 BBa_K084008] transformed cells which express LVA-tagged RhlI protein was lower than the culture containing cells which express untagged RhlI protein.It shows that LVA-tagged RhlI protein was degraded by LVA-specific protase.However,fluorescence intensity of both cultures increased at the same time. | ||
+ | *Discussion | ||
+ | **We thought it was because the AHL concentration was quickly reached the threshold concentration and cells began to express gfp.After 2 hours,fluorescence intensity started to increase. | ||
+ | <br clear=all> | ||
[[Team:Chiba/Project/Experiments:Sender_Crosstalk|>Back to Sender experiment and result]] | [[Team:Chiba/Project/Experiments:Sender_Crosstalk|>Back to Sender experiment and result]] |
Latest revision as of 09:53, 30 October 2008
Home | The Team | The Project | Parts Submitted to the Registry | Reference | Notebook | Acknowledgements |
---|
Results and Discussion
Reaction temparature:37°C,09/12
Sender culture:1000μL,Receiver culture:1000μL
Sender culture:100μL,Receiver culture:1000μL
- Fig. 1,Fig. 2
- Results
- Green fluorescence intensity didn't increase in the culture containing BBa_K0840010(plac+CinI+LVA).We thought BBa_K084010 didn't work properly or LuxR gene didn't interact with signal molecules synthesized by BBa_K084010.
- Others responded at the same time(4 hours after induction).Final fluorescence intensity differd.
Reaction temparature:37°C
Sender culture:500μLm,Receiver culture:500μL
- Fig. 3
- Results
- Response time and final fluorescence intensity showed no significant difference.
- Discussion
- We thought AHL concentration was quickly reached the threshold concentration.The fluorescence intensity increased as gfp maturured.
- Fig. 4
- Results
- No significant difference in fluorescence intensity between the culture containing [http://partsregistry.org/Part:BBa_K084007 BBa_K084007](plac+RhlI) gene transformed cells and the culture containing [http://partsregistry.org/Part:BBa_K084008 BBa_K084008](plac+RhlI(LVA)) gene transformed cells.
- Discussion
- We thought that the rate of AHL synthesis by each autoinducer synthase was much faster than the rate of its degradation by protease.
Reaction temparature:30°C
Sender culture:500μL,Receiver culture:500μL
- Fig. 6
- Results
- No significant difference in fluorescence intensity between the cultures containing [http://partsregistry.org/Part:BBa_K084007 BBa_K084007](plac+RhlI) gene transformed cells and the culture containing [http://partsregistry.org/Part:BBa_K084008 BBa_K084008](plac+RhlI(LVA)) gene transformed cells.
- Discussion
- We thought that the rate of AHL synthesis by each autoinducer synthase was much faster than the rate of its degradation by protease.
Sender culture:100μL,Receiver culture:1000μL
- Fig.7
- Results
- No significant difference in fluorescence intensity between the culture containing [http://partsregistry.org/Part:BBa_K084007 BBa_K084007](plac+RhlI) gene transformed cells and the culture containing [http://partsregistry.org/Part:BBa_K084008 BBa_K084008](plac+RhlI(LVA)) gene transformed cells.
- Discussion
- We thought that the rate of AHL synthesis by each autoinducer synthase was much faster than the rate of its degradation by protease.
Sender culture:10μL,Receiver culture:1000μL
- Fig.9
- Results
- The final fluorescence intensity of the culture containing [http://partsregistry.org/Part:BBa_K084008 BBa_K084008] transformed cells which express LVA-tagged RhlI protein was lower than the culture containing cells which express untagged RhlI protein.It shows that LVA-tagged RhlI protein was degraded by LVA-specific protase.However,fluorescence intensity of both cultures increased at the same time.
- Discussion
- We thought it was because the AHL concentration was quickly reached the threshold concentration and cells began to express gfp.After 2 hours,fluorescence intensity started to increase.
>Back to Sender experiment and result