Team:The University of Alberta/Project

From 2008.igem.org

(Difference between revisions)
(→Other Info)
 
(10 intermediate revisions not shown)
Line 1: Line 1:
-
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta}} https://static.igem.org/mediawiki/2008/9/9a/Home.png]</span>
+
<html>
-
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Team}} https://static.igem.org/mediawiki/2008/2/2a/Team1.png]</span>
+
<head>
-
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Project}} https://static.igem.org/mediawiki/2008/9/92/Project.png]</span>
+
<style>
-
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Parts}} https://static.igem.org/mediawiki/2008/7/79/Parts.png]</span>
+
table {
-
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Modeling}} https://static.igem.org/mediawiki/2008/3/3c/Modeling.png]</span>
+
  background-color: #191919;
-
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Notebook}} https://static.igem.org/mediawiki/2008/9/95/Notebook.png]</span><br>
+
  font-color: #FFFFFF;
-
<br>
+
  color:white;
-
'''Click a Button to see info on that Project!'''<br>
+
}
-
<br>
+
a.menu {
-
<span class="plainlinks">[{{SERVER}}{{localurl:Plant_Project:The_University_of_Alberta}} https://static.igem.org/mediawiki/2008/4/47/Plantbutton.jpg]</span>
+
  background-color: #191919;
-
<span class="plainlinks">[{{SERVER}}{{localurl:Plastic_Project:The_University_of_Alberta}} https://static.igem.org/mediawiki/2008/9/97/Plasticbutton.jpg]</span>
+
  color: white;
-
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Butanerd}} https://static.igem.org/mediawiki/2008/2/24/Butanerd_button.jpg]</span>
+
  width: 10em;
 +
}
-
==Journals==
+
.firstHeading {
 +
  color:white;
 +
}
-
===Synthetic Receptors===
+
#bodyContent {
-
<li>'''An estrogen receptor-based transactivator XVE mediates highly inducible gene expression in transgenic plants''' Jianru Zuo, Wi-Wen Niu and Nam-Hai Chua <br>
+
    background-color: #191919;
-
[http://www.blackwell-synergy.com/doi/full/10.1046/j.1365-313x.2000.00868.x?prevSearch=allfield%3A%28chua%29| Link]<br>
+
    }
-
===Estrogen Receptors===
+
#content {
 +
    background-color: 000000;
 +
    }
-
<li>'''Estrogen response element-dependent regulation of transcriptional activation of estrogen receptors  and ß by coactivators and corepressors''' C M Klinge, S C Jernigan, K A Mattingly, K E Risinger and J Zhang <br>[http://jme.endocrinology-journals.org/cgi/content/full/33/2/387| Link]<br>
+
#footer-box {
 +
  background-color: #000000;
 +
}
 +
p {
 +
  color:#333333;
 +
}
 +
body {
 +
  background-color:#ffffff;
 +
}
 +
.firstHeading {
 +
  display:none;
 +
}
 +
</style>
 +
</head>
 +
</html>
-
<li>'''Cooperative Coactivation of Estrogen Receptor  in ZR-75 Human Breast Cancer Cells by SNURF and TATA-binding Protein''' Bradley Saville, Hetti Poukka, Mark Wormke, Olli A. Jänne, Jorma J. Palvimo, Matthew Stoner¶, Ismael Samudio, and Stephen Safe <br>[http://www.jbc.org/cgi/content/full/277/4/2485| Link]<br>
 
-
<li>'''Identification of a Novel RING Finger Protein as a Coregulator in Steroid Receptor-Mediated Gene Transcription''' Anu-Maarit Moilanen, Hetti Poukka, Ulla Karvonen, Marika Häkli, Olli A. Jänne, and Jorma J. Palvimo<br> [http://mcb.asm.org/cgi/content/full/18/9/5128| Link]<br>
 
 +
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta}} https://static.igem.org/mediawiki/2008/a/af/HOMEUAB.png]</span>
 +
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Team}} https://static.igem.org/mediawiki/2008/7/7c/TEAMUA.png]</span>
 +
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Project}} https://static.igem.org/mediawiki/2008/7/7e/PROJECTUA.png]</span>
 +
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Parts}} https://static.igem.org/mediawiki/2008/c/c0/PARTSUA.png]</span>
 +
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Notebook}} https://static.igem.org/mediawiki/2008/f/f9/NOTEBOOKUA.png]</span>
-
<li>'''High level expression of full-length estrogen receptor in Escherichia coli is facilitated by the uncoupler of oxidative phosphorylation, CCCP ''' Zhang C.C.; Glenn K.A.; Kuntz M.A.; Shapiro D.J.1<br>
 
-
[http://www.ingentaconnect.com/content/els/09600760/2000/00000074/00000004/art00120;jsessionid=22tnudxvlkl5k.alice?format=print| Link]<br>
 
-
 
-
<li>'''Nuclear receptor coactivators function in estrogen receptor- and progestin receptor-dependent aspects of sexual behavior in female mice''' Heather A. Molenda-Figueiraa, Casey A. Williamsa, Andreana L. Griffina, Eric M. Rutledgeb, Jeffrey D. Blausteina and Marc J. Tetela <br>
 
-
[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WGC-4K5HWP0-2&_user=1067472&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000051251&_version=1&_urlVersion=0&_userid=1067472&md5=e1dd22c068b2b8288136f34eab6b6514| Link]<br>
 
-
 
-
<li>'''Estrogen receptor interaction with estrogen response elements '''Carolyn M. Klinge<br>[http://nar.oxfordjournals.org/cgi/content/full/29/14/2905#SEC2| Link]<br>
 
-
 
-
<li> '''A novel estrogen sensor based on recombinant Arxula adeninivorans cells''': Thomas Hahna, Kristina Taga, Klaus Riedela, Steffen Uhligb, Keith Baronianc, Gerd Gellissend and Gotthard Kunzea <br>[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TFC-4J32JC8-1&_user=1067472&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000051251&_version=1&_urlVersion=0&_userid=1067472&md5=2e20cf8bb0b465392aa852b10cda184b| Link]<br>
 
-
 
-
<li>'''Estrogen receptor ß: an overview and update''': Chunyan Zhao, Karin Dahlman-Wright, and Jan-Åke Gustafsson<br>
 
-
[http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=2254331 Link]
 
-
 
-
<li>'''A simple and extremely sensitive system for detecting estrogenic activity using transgenic Arabidopsis thaliana'''<br>
 
-
[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WDM-4G314HG-2&_user=1067472&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000051251&_version=1&_urlVersion=0&_userid=1067472&md5=1b0120c5a09915ebdf83160641791af0| Link]
 
-
 
-
<li>'''How estrogen-specific proteins discriminate estrogens from androgens: a common steroid binding site architecture'''<br>
 
-
[http://www.fasebj.org/cgi/content/full/17/10/1334 Link]
 
-
 
-
===Bisphenol A===
 
-
<li> '''Direct Evidence Revealing Structural Elements Essential for the High Binding Ability of Bisphenol A to Human Estrogen-Related Receptor-γ''': Hiroyuki Okada, Takatoshi Tokunaga, Xiaohui Liu, Sayaka Takayanagi, Ayami Matsushima, and Yasuyuki Shimohigashi<br> [http://www.ehponline.org/members/2007/10587/10587.html| Link]<br>
 
-
 
-
<li>'''Endocrine disruptor bisphenol A strongly binds to human estrogen-related receptor γ (ERRγ) with high constitutive activity''':Sayaka Takayanagia, Takatoshi Tokunagaa, Xiaohui Liua, Hiroyuki Okadaa, Ayami Matsushimaa and Yasuyuki Shimohigashi <br>
 
-
[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TCR-4KT6GTR-3&_user=1067472&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000051251&_version=1&_urlVersion=0&_userid=1067472&md5=f58023e52189a0ee9ef7fd6263dff43f| Link]<br>
 
-
 
-
<li>'''Aerobic degradation of bisphenol A by Achromobacter xylosoxidans strain B-16 isolated from compost leachate of municipal solid waste''':Chang Zhanga, Guangming Zenga, Li Yuana, Jian Yub, Jianbing Lia, Guohe Huanga, Beidou Xie and Hongliang Liua.
 
<br>
<br>
-
[http://www.sciencedirect.com.login.ezproxy.library.ualberta.ca/science?_ob=ArticleURL&_udi=B6V74-4N0XNBH-2&_user=1067472&_coverDate=05%2F31%2F2007&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000051251&_version=1&_urlVersion=0&_userid=1067472&md5=60133aec998135b6157590f860fb5d3d| Link]
 
-
<li>'''Molecular cloning and characterization of cytochrome P450 and ferredoxin genes involved in bisphenol A degradation in Sphingomonas bisphenolicum strain AO1''': M. Sasaki, T. Tsuchido and Y. Matsumura.
+
'''<font color=silver>Click a Button to see info on that Project!</font>'''
-
<br>[http://www.blackwell-synergy.com/doi/abs/10.1111/j.1365-2672.2008.03843.x Link]<br>
+
-
 
+
-
<li>'''Processing of Bisphenol A by Plant Tissues: Glucosylation by Cultured BY-2 Cells and Glucosylation/Translocation by Plants of Nicotiana tabacum''': Nobuyoshi Nakajima1,4, Yukiko Ohshima2, Shigeko Serizawa2, Tomoko Kouda2, John S. Edmonds2, Fujio Shiraishi2, Mitsuko Aono3, Akihiro Kubo3, Masanori Tamaoki1, Hikaru Saji3 and Masatoshi Morita2.
+
-
<br>[http://pcp.oxfordjournals.org/cgi/content/full/43/9/1036 Link]<br>
+
-
 
+
-
<li>'''Purification of Cytochrome P450 and Ferredoxin, Involved in Bisphenonol A Degradation, from Sphingomonas sp. Strain AO1''': Miho Sasaki,Ayako Akahira, Ko-ichi Oshiman, Tetsuaki Tsuchido, and Yoshinobu Matsumura.
+
-
<br> [http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=1317416 Link] <br>
+
-
 
+
-
<li>'''Biodegradation of bisphenol A by cells and cell lysate from Sphingomonas sp. strain AO1''': Miho Sasaki1, Jun-ichi Maki1, Ko-ichi Oshiman3, Yoshinobu Matsumura1, 2  and Tetsuaki Tsuchido1, 2.
+
-
<br>[http://www.springerlink.com/content/q7864l02734wg32m/fulltext.pdf Link] <br>
+
-
 
+
-
<li>'''Bisphenol A Degradation by Bacteria Isolated from River Water''': J.-H. Kang and F. Kondo.
+
-
<br>[http://www.springerlink.com/content/ge1mec9289r4cw3w/fulltext.pdf Link] <br>
+
-
 
+
-
===Plant Info===
+
-
<li>'''The Basic Helix–Loop–Helix Transcription Factor Family in Plants: A Genome-Wide Study of Protein Structure and Functional Diversity''':
+
-
Marc A. Heim, Marc Jakoby, Martin Werber, Cathie Martin, Bernd Weisshaar, and Paul C. Bailey
+
-
<Br>
+
-
[http://mbe.oxfordjournals.org/cgi/content/full/20/5/735 Link]
+
-
 
+
-
===Cell Free===
+
-
<li>'''Biosensor immunoassays for the detection of bisphenol A''': Gerardo R. Marchesinia, b, c, , , Eline Meulenberga, Willem Haasnootb and Hubertus Irthc
+
-
<br>[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TF4-4D04TNM-1&_user=1067472&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000051251&_version=1&_urlVersion=0&_userid=1067472&md5=4aab2bf3161d728c5c3bd69a3c418800 Link]
+
-
 
+
-
<li>'''Basis of a High-Throughput Method for Nuclear Receptor Ligands''': Tomohiko Kanayama, Satoru Mamiya, Tsutomu Nishihara and Jun-ichi Nishikawa J. Biochem. 133, 791–797 (2003)<br>[http://jb.oxfordjournals.org/cgi/reprint/133/6/791?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=1&author1=kanayama&author2=nishikawa&andorexacttitle=and&andorexacttitleabs=and&andorexactfulltext=and&searchid=1&FIRSTINDEX=0&sortspec=relevance&resourcetype=HWCIT Link]<br>
+
-
 
+
-
===Prokaryotic Expression===
+
-
 
+
-
<li>'''High level expression of full-length estrogen receptor in
+
-
Escherichia coli is facilitated by the uncoupler of oxidative
+
-
phosphorylation, CCCP''':Cheng Cheng Zhang, Kevin A. Glenn 1, Martin A. Kuntz, David J. Shapiro. Journal of Steroid Biochemistry & Molecular Biology 74 (2000) 169–178 <br>
+
-
[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T8X-4233BF2-2&_user=1067472&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000051251&_version=1&_urlVersion=0&_userid=1067472&md5=d1f19b9d53d5416246025fdc1aeba8c0 Link]<br>
+
-
 
+
-
===Other Info===
+
-
<li>'''Natural Animal Coloration Can Be Determined by a Nonfluorescent Green Flourescent Protein Homolog''': Lukyanov K., Fradkov A., Gurskaya N., Matz M., Labas Y., Savitsky A., Markelov M., Zaraisky A., Zhao X., Fang Y., Tan W., and Lukyanov S.
+
<br>
<br>
-
[http://www.jbc.org/cgi/content/abstract/275/34/25879 Link]
+
<span class="plainlinks">[{{SERVER}}{{localurl:Plant_Project:The_University_of_Alberta}} https://static.igem.org/mediawiki/2008/4/47/Plantbutton.jpg]</span>
 +
<span class="plainlinks">[{{SERVER}}{{localurl:Plastic_Project:The_University_of_Alberta}} https://static.igem.org/mediawiki/2008/9/97/Plasticbutton.jpg]</span>
 +
<span class="plainlinks">[{{SERVER}}{{localurl:Team:The_University_of_Alberta/Butanerd}} https://static.igem.org/mediawiki/2008/2/24/Butanerd_button.jpg]</span>
-
<li>'''An impedimetric immunosensor for the label-free detection of bisphenol A''':Md. Aminur Rahmana, Muhammad J.A. Shiddikya, Jang-Su Park and Yoon-Bo Shim,
 
<br>
<br>
-
[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TFC-4M3J0PC-4&_user=1067472&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000051251&_version=1&_urlVersion=0&_userid=1067472&md5=88089d3f9567b0671e2606a2820fc0c6 Link]
 
-
 
-
<li>'''Simultaneous Determination of 4-Nonylphenol and Bisphenol A in Sewage Sludge''':Roland J. W. Meesters and Horst Fr. Schröder*
 
-
[http://pubs.acs.org/cgi-bin/article.cgi/ancham/2002/74/i14/html/ac011258q.html link]
 
-
==Other documents==
+
==<font color=gold>WELCOME</font>==
-
==Sequencing Results==
+
<font color=silver>Well here you are on our project page.  We have 3 projects.  Our major project is the Plastic project (Bisphenol Eh?), with two supplementary projects focused on an iGEM plant binary vector (Plant Project) and butanol synthesis (Butanerds).  Enjoy.
-
Click [[Team:The_University_of_Alberta/Sequencing|here]] for sequences and chromatograms.
+

Latest revision as of 22:06, 29 October 2008


[http://2008.igem.org/Team:The_University_of_Alberta HOMEUAB.png] [http://2008.igem.org/Team:The_University_of_Alberta/Team TEAMUA.png] [http://2008.igem.org/Team:The_University_of_Alberta/Project PROJECTUA.png] [http://2008.igem.org/Team:The_University_of_Alberta/Parts PARTSUA.png] [http://2008.igem.org/Team:The_University_of_Alberta/Notebook NOTEBOOKUA.png]


Click a Button to see info on that Project!
[http://2008.igem.org/Plant_Project:The_University_of_Alberta Plantbutton.jpg] [http://2008.igem.org/Plastic_Project:The_University_of_Alberta Plasticbutton.jpg] [http://2008.igem.org/Team:The_University_of_Alberta/Butanerd Butanerd_button.jpg]


WELCOME

Well here you are on our project page. We have 3 projects. Our major project is the Plastic project (Bisphenol Eh?), with two supplementary projects focused on an iGEM plant binary vector (Plant Project) and butanol synthesis (Butanerds). Enjoy.

Retrieved from "http://2008.igem.org/Team:The_University_of_Alberta/Project"