Team:Warsaw/Calendar-Main/21 July 2008
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<h3>Cloning omega-A fusion on <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pKSII%2B>pKS</a> (second attempt)</h3> | <h3>Cloning omega-A fusion on <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pKSII%2B>pKS</a> (second attempt)</h3> | ||
<h4>Michał L., Ewa, Marcin</h4> | <h4>Michał L., Ewa, Marcin</h4> | ||
- | <p>We have finally got rid of | + | <p>We have finally got rid of evil phage infection and we are able to work with <i>E. coli</i> again. Hurray!</p> |
<ol> | <ol> | ||
<li>Since the phage is gone we can continue this cloning:</li> | <li>Since the phage is gone we can continue this cloning:</li> | ||
- | <li>Restriction <a href="https://2008.igem.org/Wiki/Team:Warsaw/ | + | <li>Restriction <a href="https://2008.igem.org/Wiki/Team:Warsaw/protocols#digest">digest</a> of PCL product and <A HREF=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pKSII%2B>pKS</a> vector with SacI and NotI (BamHI buffer) .</li> |
<li><a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#ligation">Ligation</a> of omega-A fusion with <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pKSII%2B>pKS</a> vector.</li> | <li><a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#ligation">Ligation</a> of omega-A fusion with <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pKSII%2B>pKS</a> vector.</li> | ||
<li><a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#chemotransform">Transformation</a> of Top10 with ligation product.</li> | <li><a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#chemotransform">Transformation</a> of Top10 with ligation product.</li> | ||
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<h3>Cloning of protein A DNA to OmpA constructs</h3><h4>Michał K.</h4> | <h3>Cloning of protein A DNA to OmpA constructs</h3><h4>Michał K.</h4> | ||
<p><ol> | <p><ol> | ||
- | <li> <a href="https://2008.igem.org/Wiki/Team:Warsaw/ | + | <li> <a href="https://2008.igem.org/Wiki/Team:Warsaw/protocols#digest">Digest</a> of <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pKSII+A>pKS-A</a> plasmid, <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-omega>pACYC177+OmpA_omega</a> and <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-alpha>pACYC177+OmpA_alpha</a> with NotI and SacI (BamHI buffer). pACYC177 vectors were also <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#removing">dephosphorylated (with CIAP)</a>.</li> |
<li> Gel electrophoresis and <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#DNA_isolation_from_agarose_gel">gel-out</a> of proper bands (420 bp - <A href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pKSII+A>pKS-A</a> lane, 4050 bp - <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-omega>pACYC177+OmpA_omega</a> lane and 4300 bp <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-alpha>pACYC177+OmpA_alpha</a> lane) (<a href="https://2008.igem.org/Team:Warsaw/Calendar-Main/21_July_2008#fig1">Fig. 1.</a>).</li> | <li> Gel electrophoresis and <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#DNA_isolation_from_agarose_gel">gel-out</a> of proper bands (420 bp - <A href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pKSII+A>pKS-A</a> lane, 4050 bp - <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-omega>pACYC177+OmpA_omega</a> lane and 4300 bp <a href=https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-alpha>pACYC177+OmpA_alpha</a> lane) (<a href="https://2008.igem.org/Team:Warsaw/Calendar-Main/21_July_2008#fig1">Fig. 1.</a>).</li> | ||
<li> <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#ligation">Ligation</a> of A DNA fragment with both pACYC177 vectors.</li> | <li> <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#ligation">Ligation</a> of A DNA fragment with both pACYC177 vectors.</li> |
Latest revision as of 16:51, 29 October 2008
Cloning omega-A fusion on pKS (second attempt)Michał L., Ewa, MarcinWe have finally got rid of evil phage infection and we are able to work with E. coli again. Hurray!
Cloning of protein Z DNA to pET15b-OmpA-omega in place of OmpAPaweł
Cloning of protein A DNA to OmpA constructsMichał K.
1. Marker 2. digested pACYC177_OpmA_omega 3. digested pKSA
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