Team:University of Sheffield /References
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- | *1. Andersen, J.B et al. ('''1998''') New Unstable Variants of Green Fluorescent Protein for Studies of Transient Gene Expression in Bacteria. '' Applied and Environmental Microbiology'' | + | <!-- If you are creating a new page, start cutting here --> |
- | *2. Cerca, N. and Jefferson, K. K. ('''2008''') Effect of Growth Conditions On Poly-N-acetylglucosamine expression and Biofilm Formation in Escherichia coli | + | [[Image:UniShefBanner.jpg|center]] |
- | *3. Goller, C. et al. ( '''2006''') The Cation-Responsive Protein NhaR of ''Excherichia coli'' Activates ''pgaABCD'' Transcription, Required for Production of the Biofilm Adhesin Poly-Beta-1, 6 - N - D - Glucosamine. ''Journal of Bacteriology'' | + | |
+ | |||
+ | {| style="color:#888888;background-color:##888888;" cellpadding="5" cellspacing="2" border="2" bordercolor=#888888 width="85%" align="center" | ||
+ | !align="center"|[[Team:University_of_Sheffield |Introduction]] | ||
+ | !align="center"|[[Team:University_of_Sheffield /Project|Our project]] | ||
+ | !align="center"|[[Team:University_of_Sheffield /Modelling|Modelling]] | ||
+ | !align="center"|[[Team:University_of_Sheffield /Wet Lab|Wet Lab]] | ||
+ | !align="center"|[[Team:University_of_Sheffield /Lab Books| Our team]] | ||
+ | !align="center"|[[Team:University_of_Sheffield /Timetable| Timetable]] | ||
+ | !align="center"|[[Team:University_of_Sheffield /Misc| Miscellaneous]] | ||
+ | |} | ||
+ | |||
+ | <!-- and finish cutting here! --> | ||
+ | |||
+ | =References= | ||
+ | *1.) Andersen, J.B et al. ('''1998''') New Unstable Variants of Green Fluorescent Protein for Studies of Transient Gene Expression in Bacteria. '' Applied and Environmental Microbiology'' | ||
+ | |||
+ | *2.) Cerca, N. and Jefferson, K. K. ('''2008''') Effect of Growth Conditions On Poly-N-acetylglucosamine expression and Biofilm Formation in Escherichia coli | ||
+ | |||
+ | *3.) Goller, C. et al. ( '''2006''') The Cation-Responsive Protein NhaR of ''Excherichia coli'' Activates ''pgaABCD'' Transcription, Required for Production of the Biofilm Adhesin Poly-Beta-1, 6 - N - D - Glucosamine. ''Journal of Bacteriology'' | ||
+ | |||
+ | *4.)Datsenko & Wanner, ('''2000'''), One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products | ||
+ | |||
+ | *5.) Higgins, Bassler et al, ('''2007'''), The major Vibrio cholerae autoinducer and its role in virulence factor production | ||
+ | |||
+ | *6.) Hammer & Bassler, ('''2007'''), Regulatory small RNAs circumvent the conventional quorum sensing pathway in pandemic Vibrio cholerae | ||
+ | |||
+ | *7.) Jun Zhu, Melissa B. Miller, et al, ('''2001'''), Quorum-sensing regulators control virulence gene expression in Vibrio cholerae | ||
+ | |||
+ | *8.)Tomenius, Pernestig et al, ('''2005'''), Genetic and functional characterization of the E.coli BarA-UvrY Two-componant system | ||
+ | |||
+ | *9.) Suzuki et al, ('''2002'''), Regulatory Circuitry of thr CsrA/CrsB and BarA/UvrY systems of E.coli | ||
+ | |||
+ | *10.) Sahu, Acharya et al, ('''2003'''), The bacterial adaptive response gene, barA, encodes a novel conserved istidine kinase regulatory switch for adaptation and modulation of metabolism in E.coli | ||
+ | |||
+ | *11) Sabnis, A. N. et al., ('''1995'''), Pleiotropic Regulation of Central Carbohydrate Metabolism in Escherichia coli via the Gene csrA | ||
+ | |||
+ | *12) Ytoh, J. et al., ('''2006'''), Roles of pgaABCD Genes in Synthesis, Modification, and Export of the Escherichia coli Biofilm Adhesin Poly-beta-1,6-N-Acetyl-D-Glucosamine | ||
+ | |||
+ | *13) Yang., H. et al. , ('''1995'''), Coordinate Genetic Regulation of Glycogen Catabolism and Biosynthesis in scherichia coli via the CsrA Gene Product | ||
+ | |||
+ | *14) Romeo, T. ('''1998'''), Global Regulation by the small RNA-binding protein CsrA and non-coding RNA molecule CsrB | ||
+ | |||
+ | *15) Wang, X. et al. ('''2005'''), CsrA post-transcriptionally represses pgaABCD,responsible for synthesis of a iofilm polysaccharide adhesin of ''Escherichia coli'' | ||
+ | |||
+ | *16) Romeo, T. et al. ('''1995'''), Identification and Molecular Characterization of ''csrA'', a Pleiotropic Gene from Escherichia coli That Affects Glycogen Biosynthesis, Gluconeogenesis, Cell Size, and Surface Properties | ||
+ | |||
+ | *17) Pernestig, A. K. et al. ('''2002'''), The Escherichia coli BarA-UvrY Two-Component System Is Needed for Efficient Switching between Glycolytic and Gluconeogenic Carbon Sources | ||
+ | |||
+ | *18) Pernestig, A. K. et al. ('''2000'''), Identification of UvrY as the Cognate Response Regulator for the BarA Sensor Kinase in '' Escherichia coli'' | ||
+ | |||
+ | *19) Mondragon, V. et al. ('''2006'''), pH-Dependent Activation of the BarA-UvrY Two-Component System in ''Escherichia coli'' | ||
+ | |||
+ | *20) Rogov, V. V. et al. ('''2006'''), A New Structural Domain in the ''Escherichia coli'' RcsC Hybrid Sensor Kinase onnects Histidine Kinase and Phosphoreceiver Domains | ||
+ | |||
+ | *21) Tomenius, H. et al. ( '''2006'''), The ''Escherichia coli'' BarA-UvrY two-component system is a virulence determinant in the urinary tract | ||
+ | |||
+ | *22) Zhu, Y. and Inouye, M. ('''2004'''), The HAMP Linker in Histidine Kinase Dimeric Receptors Is Critical for Symmetric Transmembrane Signal Transduction | ||
+ | |||
+ | *23) Zhu, y. and Inouye, M. ('''2008'''), Analysis of the Role of the EnvZ Linker Region in Signal Transduction Using a Chimeric Tar/EnvZ Receptor Protein, Tez1 | ||
+ | |||
+ | *24) Walters, M. and Sperandio, V. ('''2006'''), Quorum sensing in ''Escherichia coli'' and ''Salmonella'' | ||
+ | |||
+ | *25) Gonzales, J. E. and Keshavan, N. D. ('''2006'''), Messing with Bacterial Quorum Sensing | ||
+ | |||
+ | *26) Haseltine, E. L. and Arnold, F. H. ('''2007'''), Implications of Rewiring Bacterial Quorum Sensing | ||
+ | |||
+ | *27) Alur, J. et al. ('''2002'''), Modeling and Analyzing Biomolecular Networks | ||
+ | |||
+ | *28) Dunlap, P. V. ('''1999'''), Quorum Regulation of Luminescence in ''Vibrio fischeri'' | ||
+ | |||
+ | *29) Sveningsen, S. L. et al. ('''2008'''), A negative feedback loop involving small RNAs accelerates ''Vibrio cholerae’s'' transition out of quorum-sensing mode | ||
+ | |||
+ | *30) De Silva, R. S. et al. ('''2007'''), Crystal Structure of the ''Vibrio cholerae'' Quorum-Sensing Regulatory Protein HapR | ||
+ | |||
+ | *31) Lenz, D. H. et al. ('''2005'''), CsrA and three redundant small RNAs regulate quorum sensing in ''Vibrio cholerae'' | ||
+ | |||
+ | *32) Heidelberg, J. F. et al. ('''2000'''), DNA sequence of both chromosomes of the cholera pathogen ''Vibrio cholerae | ||
+ | '' | ||
+ | |||
+ | *33) Neidtich, M. B. et al. ('''2006'''), Ligand-Induced Asymmetry in Histidine Sensor Kinase Complex Regulates Quorum Sensing | ||
+ | |||
+ | *34) Matson, J. S. et al. ('''2007'''), Regulatory Networks Controlling ''Vibrio cholerae'' Virulence Gene Expression | ||
+ | |||
+ | *35) Hammer, B. K. and Bassler, B. L. ('''2003'''), Quorum sensing controls biofilm formation in ''Vibrio cholerae'' | ||
+ | |||
+ | *36) |
Latest revision as of 19:32, 28 October 2008
Introduction | Our project | Modelling | Wet Lab | Our team | Timetable | Miscellaneous |
---|
References
- 1.) Andersen, J.B et al. (1998) New Unstable Variants of Green Fluorescent Protein for Studies of Transient Gene Expression in Bacteria. Applied and Environmental Microbiology
- 2.) Cerca, N. and Jefferson, K. K. (2008) Effect of Growth Conditions On Poly-N-acetylglucosamine expression and Biofilm Formation in Escherichia coli
- 3.) Goller, C. et al. ( 2006) The Cation-Responsive Protein NhaR of Excherichia coli Activates pgaABCD Transcription, Required for Production of the Biofilm Adhesin Poly-Beta-1, 6 - N - D - Glucosamine. Journal of Bacteriology
- 4.)Datsenko & Wanner, (2000), One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
- 5.) Higgins, Bassler et al, (2007), The major Vibrio cholerae autoinducer and its role in virulence factor production
- 6.) Hammer & Bassler, (2007), Regulatory small RNAs circumvent the conventional quorum sensing pathway in pandemic Vibrio cholerae
- 7.) Jun Zhu, Melissa B. Miller, et al, (2001), Quorum-sensing regulators control virulence gene expression in Vibrio cholerae
- 8.)Tomenius, Pernestig et al, (2005), Genetic and functional characterization of the E.coli BarA-UvrY Two-componant system
- 9.) Suzuki et al, (2002), Regulatory Circuitry of thr CsrA/CrsB and BarA/UvrY systems of E.coli
- 10.) Sahu, Acharya et al, (2003), The bacterial adaptive response gene, barA, encodes a novel conserved istidine kinase regulatory switch for adaptation and modulation of metabolism in E.coli
- 11) Sabnis, A. N. et al., (1995), Pleiotropic Regulation of Central Carbohydrate Metabolism in Escherichia coli via the Gene csrA
- 12) Ytoh, J. et al., (2006), Roles of pgaABCD Genes in Synthesis, Modification, and Export of the Escherichia coli Biofilm Adhesin Poly-beta-1,6-N-Acetyl-D-Glucosamine
- 13) Yang., H. et al. , (1995), Coordinate Genetic Regulation of Glycogen Catabolism and Biosynthesis in scherichia coli via the CsrA Gene Product
- 14) Romeo, T. (1998), Global Regulation by the small RNA-binding protein CsrA and non-coding RNA molecule CsrB
- 15) Wang, X. et al. (2005), CsrA post-transcriptionally represses pgaABCD,responsible for synthesis of a iofilm polysaccharide adhesin of Escherichia coli
- 16) Romeo, T. et al. (1995), Identification and Molecular Characterization of csrA, a Pleiotropic Gene from Escherichia coli That Affects Glycogen Biosynthesis, Gluconeogenesis, Cell Size, and Surface Properties
- 17) Pernestig, A. K. et al. (2002), The Escherichia coli BarA-UvrY Two-Component System Is Needed for Efficient Switching between Glycolytic and Gluconeogenic Carbon Sources
- 18) Pernestig, A. K. et al. (2000), Identification of UvrY as the Cognate Response Regulator for the BarA Sensor Kinase in Escherichia coli
- 19) Mondragon, V. et al. (2006), pH-Dependent Activation of the BarA-UvrY Two-Component System in Escherichia coli
- 20) Rogov, V. V. et al. (2006), A New Structural Domain in the Escherichia coli RcsC Hybrid Sensor Kinase onnects Histidine Kinase and Phosphoreceiver Domains
- 21) Tomenius, H. et al. ( 2006), The Escherichia coli BarA-UvrY two-component system is a virulence determinant in the urinary tract
- 22) Zhu, Y. and Inouye, M. (2004), The HAMP Linker in Histidine Kinase Dimeric Receptors Is Critical for Symmetric Transmembrane Signal Transduction
- 23) Zhu, y. and Inouye, M. (2008), Analysis of the Role of the EnvZ Linker Region in Signal Transduction Using a Chimeric Tar/EnvZ Receptor Protein, Tez1
- 24) Walters, M. and Sperandio, V. (2006), Quorum sensing in Escherichia coli and Salmonella
- 25) Gonzales, J. E. and Keshavan, N. D. (2006), Messing with Bacterial Quorum Sensing
- 26) Haseltine, E. L. and Arnold, F. H. (2007), Implications of Rewiring Bacterial Quorum Sensing
- 27) Alur, J. et al. (2002), Modeling and Analyzing Biomolecular Networks
- 28) Dunlap, P. V. (1999), Quorum Regulation of Luminescence in Vibrio fischeri
- 29) Sveningsen, S. L. et al. (2008), A negative feedback loop involving small RNAs accelerates Vibrio cholerae’s transition out of quorum-sensing mode
- 30) De Silva, R. S. et al. (2007), Crystal Structure of the Vibrio cholerae Quorum-Sensing Regulatory Protein HapR
- 31) Lenz, D. H. et al. (2005), CsrA and three redundant small RNAs regulate quorum sensing in Vibrio cholerae
- 32) Heidelberg, J. F. et al. (2000), DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
- 33) Neidtich, M. B. et al. (2006), Ligand-Induced Asymmetry in Histidine Sensor Kinase Complex Regulates Quorum Sensing
- 34) Matson, J. S. et al. (2007), Regulatory Networks Controlling Vibrio cholerae Virulence Gene Expression
- 35) Hammer, B. K. and Bassler, B. L. (2003), Quorum sensing controls biofilm formation in Vibrio cholerae
- 36)