Team:KULeuven/Road Map

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Revision as of 08:31, 22 May 2008

Home	The Team	Road Map	The Project	Parts Submitted to the Registry	Modeling	Notebook

This page serves as a preliminary road map: What are we going to make? How? Where can we get ideas? Where and when are we going to discuss them?
Eventually, all will be moved to its dedicated space on the wiki.

Meetings

Brainstorm

students and instructors brainstorm: Thursday May 22nd 10am @ ESAT 01.57

brainstorm project (each student presents his/her 3 favourite projects of previous iGEMs)
- iGEM judging tracks
  - Foundational Research - basic science and engineering research
  - Information Processing - genetically encoded control, logic, and memory
  - Energy - biological fuels, feedstocks, and other energy projects
  - Environment- sensing bioremediation of environmental state
  - Health & Medicine - applied projects with the goal of directly improving the human condition

take group picture
choose our logo
iGEM what/when - summer availability - last exams (we'll put this on wiki)
interdisciplinarity?
background - organise tutorials / lab intro:
- biotechnology - lab experience
- matlab

wiki ideas / suggestions
teachers workshop Paris May 31st
[http://www.kuleuven.be/bioscenter/ BioSCENTer launch event] - May 28th, 15u35/45 - Max Weber auditorium, Parkstraat 51
introduce wiki and www.kuleuven.be/bioscenter/igem

Interesting reads

General

[http://parts.mit.edu/wiki/index.php/Resources introductory resources on the iGEM competition]
[http://www.nature.com/nature/comics/syntheticbiologycomic/index.html synthetic biology comic]

iGEM and BioBricks

[http://partsregistry.org/wiki/index.php/Help:Team_experience_tutorial iGEM tutorial]
[http://openwetware.org/wiki/IGEM:IMPERIAL/2006/project/Oscillator/Theoretical_Analyses example of an iGEM model - Imperial 2006]

[http://partsregistry.org/Main_Page Registry of Standard Biological Parts]
[http://partsregistry.org/Help:IGEM_08_DNA_distribution BioBricks 2008 spring distribution]
[http://partsregistry.org/Measurement BioBricks measurement]
[http://openwetware.org/wiki/Parts_characterization parts characterization]

Original research papers and reviews

Project brainstorm

Favourite previous iGEM projects

Maarten Breckpot

Nathalie Busschaert

Jonas Demeulemeester

[http://parts.mit.edu/igem07/index.php/Ljubljana Virotrap Ljubljana 2007]
[http://parts.mit.edu/igem07/index.php/Princeton RNAi enhanced logic circuit Princeton 2007]
Other nice parts/devices:
- Caltech: Riboswitch design for targeted cell death/molecular sensor
- Cambridge: Inducible bigger pore protein for E.coli
- Harvard: Quorum-sensing & targeting!
- Melbourne: Red/blue light responsive system through chimeric photoreceptors-kinases
- Peking U: λ-based bistable switch = very powerful
- UCSF: compartmentalization! Rewired MAPK cascade signaling through scaffolds ≅ circuit board

Andim Doldurucu

Jan Mertens

Benjamien Moeyaert

[http://openwetware.org/wiki/IGEM:Harvard/2006/DNA_nanostructures Harvard 20006: nanostructured DNA containers]
[http://parts.mit.edu/igem07/index.php/Berkeley_UC Bactoblood]

Stefanie Roberfroid

Hanne Tytgat

Elke Van Assche

[http://parts.mit.edu/wiki/index.php/MIT_2006 Eau d'E.coli MIT 2006]
[http://parts.mit.edu/igem07/index.php/Berkeley_UC Bactoblood Berkeley UC 2007]
[http://parts.mit.edu/igem07/index.php/Princeton RNAi enhanced logic circuit Princeton 2007]

Nick Van Damme

Antoine Vandermeersch

[http://parts2.mit.edu/wiki/index.php/University_of_Texas_2006 Texas 2006: Edge Detector]
[http://parts.mit.edu/igem07/index.php/Rice/Project_B:_Quorumtaxis Rice 2007: Quorumtaxis]
[http://parts.mit.edu/igem07/index.php/Berkeley_LBL Berkeley LBL 2007: Solar Bacter]

Dries Vercruysse

Sigrid De Keersmaecker

[http://parts.mit.edu/igem07/index.php/MIT Sensing & removing Hg ions - MIT 2007]
[http://parts.mit.edu/igem07/index.php/Edinburgh Self-flavouring yoghurt - Edinburgh 2007]
[http://parts.mit.edu/igem07/index.php/Missouri_Miners Biological Timer - Missouri Miners 2007]
[http://parts.mit.edu/igem07/index.php/Ljubljana Virotrap - Ljubljana 2007]
[http://parts.mit.edu/igem07/index.php/Taipei/Taipei GlucOperon - Taipei 2007]
[http://parts.mit.edu/igem07/index.php/Berkeley_LBL Solar Bacter - Berkeley_LBL 2007]

Other

[http://openwetware.org/wiki/IGEM:Idea_exchange Idea exchange - iGEM ideas posted by other teams]

@@ Line 33: / Line 33: @@
 * choose our logo
 * iGEM what/when - summer availability - last exams (we'll put this on wiki)
+* interdisciplinarity?
 * background - organise tutorials / lab intro: <br>
 ** biotechnology - lab experience