Team:UNIPV-Pavia/Parts

From 2008.igem.org

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Revision as of 19:55, 29 July 2008


Home.jpg Home Unipv logo.jpg The Team And.jpg The Project Safety.jpg Biological Safety Dna.png Parts Submitted to the Registry
Laptop.jpg Dry Lab Pipette.jpg Wet Lab Math.gif Modeling Note.jpg Protocols Notebook.gif Activity Notebook


Assembled Parts Notation

In notebook section we sometimes use abbreviations to name assembled parts. New parts' official name, notebook abbreviations and new parts description are reported in the following table:


New Part Notebook Name Assembled Parts(code) Assembled Parts(name) Vector Description
- 01 BBa_J23100-BBa_E0040 Pcon-GFP_protein_generator BBa_J61002 Test
- 02 BBa_J23100-BBa_B0030 Pcon-RBS pSB1A2 Intermediate
- 03 BBa_R0051-BBa_B0030 Plambda-RBS pSB1A2 Intermediate
- 04 BBa_B0030-BBa_E0040 RBS-GFP pSB1A2 Intermediate
- 05 BBa_B0030-BBa_C0051 RBS-cI pSB1A2 Intermediate
- 06 BBa_J23100-BBa_E1010 RBS-RFP pSB1A2 Intermediate
- 07 BBa_B0030-BBa_C0061 RBS-luxI pSB1A2 Intermediate
- 08 BBa_B0030-BBa_C0078 RBS-lasI pSB1A2 Intermediate
- 09 BBa_J23100-BBa_B0030-BBa_C0012 Pcon-RBS-lacI pSB1A2 Intermediate
- 10 BBa_J23100-BBa_B0030-BBa_C0040 Pcon-RBS-tetR pSB1A2 Intermediate
- 11 BBa_J23100-BBa_B0030-BBa_I15010 Pcon-RBS-cph8 pSB1A2 Intermediate
- 12 BBa_R0051-BBa_B0030-BBa_C0062 Plambda-RBS-luxR pSB1A2 Intermediate
- 13 BBa_B0030-BBa_E0040-BBa_B1006 RBS-GFP-T pSB1AK3 GFP protein generator with 39bp artificial terminator
- 14 BBa_B0030-BBa_C0051-BBa_B0030 RBS-cI-RBS pSB1A2 Intermediate
- 15 BBa_B0030-BBa_E1010-BBa_B1006 RBS-RFP-T pSB1AK3 GFP protein generator with 39bp artificial terminator
- 16 BBa_B0030-BBa_C0061-BBa_B1006 RBS-luxI-T pSB1AK3 luxI protein generator RCT
- 17 BBa_B0030-BBa_C0078-BBa_B1006 RBS-lasI-T pSB1AK3 lasI protein generator RCT
- 18 BBa_B0030-BBa_I15009 RBS-pcyA pSB1A2 Intermediate
- 19 BBa_J23100-BBa_B0030-BBa_C0012-BBa_B1006 Pcon-RBS-lacI-T pSB1AK3 lacI protein generator PRCT
- 20 BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006 Pcon-RBS-tetR-T pSB1AK3 tetR protein generator PCRT
- 21 BBa_J23100-BBa_B0030-BBa_I15010-BBa_B0030 Pcon-RBS-cph8-RBS ? Intermediate
- 22 BBa_R0051-BBa_B0030-BBa_C0062-BBa_B1006 Plambda-RBS-luxR-T pSB1AK3 Plambda regulated luxR protein generator PRCT
- 23 BBa_B0030-BBa_C0051-BBa_B0030-BBa_C0079 RBS-cI-RBS-lasR pSB1A2 Intermediate
- 24 BBa_B0030-BBa_C0061-BBa_B1006-BBa_R0062 RBS-luxI-T-Plux pSB1A2 Mux - Channel 0
- 25 BBa_B0030-BBa_C0078-BBa_B1006-BBa_R0079 RBS-lasI-T-Plas pSB1A2 Mux - Channel 1
- 26 BBa_B0030-BBa_I15009-BBa_B1006 RBS-pcyA-T pSB1AK3 pcyA protein generator RCT
- 27 BBa_J23100-BBa_B0030-BBa_C0012-BBa_B1006-BBa_R0010 Pcon-RBS-lacI-T-Plac pSB1AK3 lacI composite part: PRCT-Plac
- 28 BBa_J23100-BBa_B0030-BBa_C0040-BBa_B1006-BBa_R0040 Pcon-RBS-tetR-T-Ptet pSB1A2 tetR composite part: PRCT-Ptet
- 29 BBa_J23100-BBa_B0030-BBa_I15010-BBa_B0030-BBa_I15008 Pcon-RBS-cph8-RBS-ho1 ? Intermediate
- 30 BBa_R0051-BBa_B0030-BBa_C0062-BBa_B1006-BBa_R0062 Plambda-RBS-luxR-T-Plux pSB1A2 luxR composite part: Plambda regulated PRCT-Plux
- 31 BBa_B0030-BBa_C0051-BBa_B0030-BBa_C0079-BBa_B1006 RBS-cI-RBS-lasR-T pSB1AK3 cI-lasR protein generator RCRCT
- 32 BBa_B0030-BBa_I15009-BBa_B1006-BBa_R0082 RBS-pcyA-T-Pomp pSB1A2 pcyA composite part: RCT-Pomp
- 33 BBa_J23100-BBa_B0030-BBa_I15010-BBa_B0030-BBa_I15008-BBa_B0030-BBa_I15009-BBa_B1006-BBa_R0082 Pcon-RBS-cph8-RBS-ho1-RBS-pcyA-T-Pomp ? Light responsive system under constitutive promoter: PRCRCRCT-Pomp
- 34 BBa_B0030-BBa_C0051-BBa_B0030-BBa_C0079-BBa_B1006-BBa_R0051-BBa_B0030-BBa_C0062-BBa_B1006-BBa_R0062 RBS-cI-RBS-lasR-T-Plambda-RBS-luxR-T-Plux pSB1AK3 Demux - Selector
- 35 BBa_B0030-BBa_C0051-BBa_B0030-BBa_C0079-BBa_B1006-BBa_R0051-BBa_B0030-BBa_C0062-BBa_B1006 RBS-cI-RBS-lasR-T-Plambda-RBS-luxR-T pSB1AK3 Mux - Selector
- 36 BBa_B0030-BBa_C0061-BBa_B0030-BBa_C0078-BBa_B1006-BBa_R0079 RBS-luxI-RBS-lasI-T-Plas pSB1A2 Demux - Input


  • Red-highlighted parts (11, 21, 29, 33) contain BBa_I15010 (cph8): according to IGEM DNA Repositories Quality Control (and according to our results) the sequence is inconsistent and so these parts cannot be assembled.
  • Green-coloured parts have been succesfully sequenced.
  • 24, 25, 34, 35, 36 are part of our final Mux or Demux devices.
  • Parts in gray have not been assembled yet (updated: 07-27-2008).