Team:Edinburgh/Software

From 2008.igem.org

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== Software Design ==
== Software Design ==
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Interface Layor
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Interface Layer
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Database Layor
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Database Layer
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Processing
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Processing layer
== Software Test ==
== Software Test ==

Revision as of 13:30, 6 October 2008


Contents

Software Overview

Our software is a drag-droppable web tool for model creation. Through our website, the users can select parts from the MIT registry (and other databases such as RegulonDB) and add them to a modelling basket. Once they add all the parts for a designed circuit and click "check out", a model in SBML format for the circuit will be automatically generated.

Have a try of our software, see here.

Software Requirements

There are some software that can be used to build model, such as copasi, but these softwares need some grammers, which are not convenient for biologists. In our tool, the only thing users need to do is select the parts. Then the model in SBML format will be generated automatically.

When biologists are trying to build a model, they need to search a lot of information. Our tool has a database, which includes data from all kinds of biodatabases.


Software Design

Interface Layer

Database Layer

Processing layer

Software Test