Team:Warsaw/Calendar-Main/11 July 2008

From 2008.igem.org

(Difference between revisions)
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<h3>Preparation of constructs with OmpA protein fusions</h3>
<h3>Preparation of constructs with OmpA protein fusions</h3>
<p><ol>
<p><ol>
-
<li> Colony PCR on colonies from plates with transformations OmpA_alpha. </li>
+
<li> Colony <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#pcr">PCR</a> on colonies from plates with transformations OmpA_alpha. </li>
<li> Confirmed transformant colonies inoculated to liquid LB with kanamycin.</li>
<li> Confirmed transformant colonies inoculated to liquid LB with kanamycin.</li>
</ol></p>
</ol></p>
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<h3>Preparation of construct omega-A</h3>
<h3>Preparation of construct omega-A</h3>
<p><ol>
<p><ol>
-
<li> PCR A in 50 µl<br>
+
<li> <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#pcr">PCR</a> A in 50 µl<br>
template DNA - pKS-A4 1 µl<br>
template DNA - pKS-A4 1 µl<br>
primer <html>
primer <html>
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<li>keeping in 4&deg;C</li></ol>
<li>keeping in 4&deg;C</li></ol>
</li>
</li>
-
<li> PCR omega in 50 µl<br>
+
<li> <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#pcr">PCR</a> omega in 50 µl<br>
template DNA - pUC19 1 µl<br>
template DNA - pUC19 1 µl<br>
primer OmegaLS - 2 µl<br>
primer OmegaLS - 2 µl<br>
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<li> Gel electrophoresis</li>
<li> Gel electrophoresis</li>
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<li>Reisolation from agarose gel</li>
+
<li><a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#DNA_isolation_from_agarose_gel">Reisolation</a> from agarose gel</li>
</ol>
</ol>
</p>
</p>

Revision as of 16:45, 5 October 2008

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Preparation of constructs with OmpA protein fusions

  1. Colony PCR on colonies from plates with transformations OmpA_alpha.
  2. Confirmed transformant colonies inoculated to liquid LB with kanamycin.

Cloning of protein Z DNA to OmpA constructs

2 colonies was inoculated to liquid LB broth with kanamycin

Preparation of construct omega-A

  1. PCR A in 50 µl
    template DNA - pKS-A4 1 µl
    primer AP+NotI_N - 2 µl
    primer AL+link10+homo2_N - 2 µl
    Pfu polymerase buffer + Mg2+ (from Fermentas) - 5 µl
    dNTPs - 1 µl
    Pfu turbo - 0.5 µl
    H2o - 38.5 µl

    Program:
    1. 95°C 3'
    2. 95°C 30"
    3. 62°C 45"
    4. 72°C 45"
    5. 72°C 10'
    6. keeping in 4°C
  2. PCR omega in 50 µl
    template DNA - pUC19 1 µl
    primer OmegaLS - 2 µl
    primer AOmegaPli - 2 µl
    Pfu polymerase buffer + Mg2+ (from Fermentas) - 5 µl
    dNTPs - 1 µl
    Pfu turbo - 0.5 µl
    H2o - 38.5 µl
    Program:
    1. 95°C 3'
    2. 95°C 30"
    3. 62°C 45"
    4. 72°C 45"
    5. 72°C 10'
    6. keeping in 4°C
    25 cycles
  3. Gel electrophoresis
  4. Reisolation from agarose gel