Team:NTU-Singapore/Modelling/Parameter/LysisaD

From 2008.igem.org

(Difference between revisions)
Line 6: Line 6:
<html>
<html>
<div id="arrow">
<div id="arrow">
-
<a href="https://2008.igem.org/Team:NTU-Singapore/Modelling/Parameter">
+
<a href="https://2008.igem.org/Team:NTU-Singapore/Modelling/Parameter#Lysis_production_system">
<img src="https://static.igem.org/mediawiki/2008/2/28/Back_to_param2.png"  
<img src="https://static.igem.org/mediawiki/2008/2/28/Back_to_param2.png"  
     alt="Back to parameter estimation"
     alt="Back to parameter estimation"
Line 53: Line 53:
Here the difference in Lysis protein production is more pronounced and obvious. We understand from these different trends that aD has little or no significant impact on protein production and that nD will be the main deciding factor.
Here the difference in Lysis protein production is more pronounced and obvious. We understand from these different trends that aD has little or no significant impact on protein production and that nD will be the main deciding factor.
 +
<br><br>
 +
<html>
 +
<script language=Javascript1.2>
 +
<!--
 +
 +
var tags_before_clock = "<b>It is now "
 +
var tags_middle_clock = "on"
 +
var tags_after_clock  = "</b>"
 +
 +
if(navigator.appName == "Netscape") {
 +
document.write('<layer id="clock"></layer><br>');
 +
}
 +
 +
if (navigator.appVersion.indexOf("MSIE") != -1){
 +
document.write('<span id="clock"></span>');
 +
}
 +
 +
DaysofWeek = new Array()
 +
  DaysofWeek[0]="Sunday"
 +
  DaysofWeek[1]="Monday"
 +
  DaysofWeek[2]="Tuesday"
 +
  DaysofWeek[3]="Wednesday"
 +
  DaysofWeek[4]="Thursday"
 +
  DaysofWeek[5]="Friday"
 +
  DaysofWeek[6]="Saturday"
 +
 +
Months = new Array()
 +
  Months[0]="January"
 +
  Months[1]="February"
 +
  Months[2]="March"
 +
  Months[3]="April"
 +
  Months[4]="May"
 +
  Months[5]="June"
 +
  Months[6]="July"
 +
  Months[7]="August"
 +
  Months[8]="September"
 +
  Months[9]="October"
 +
  Months[10]="November"
 +
  Months[11]="December"
 +
 +
function upclock(){
 +
var dte = new Date();
 +
var hrs = dte.getHours();
 +
var min = dte.getMinutes();
 +
var sec = dte.getSeconds();
 +
var day = DaysofWeek[dte.getDay()]
 +
var date = dte.getDate()
 +
var month = Months[dte.getMonth()]
 +
var year = dte.getFullYear()
 +
 +
var col = ":";
 +
var spc = " ";
 +
var com = ",";
 +
var apm;
 +
 +
if (date == 1 || date == 21 || date == 31)
 +
  {ender = "<sup>st</sup>"}
 +
else
 +
if (date == 2 || date == 22)
 +
  {ender = "<sup>nd</sup>"}
 +
else
 +
if (date == 3 || date == 23)
 +
  {ender = "<sup>rd</sup>"}
 +
 +
else
 +
  {ender = "<sup>th</sup>"}
 +
 +
if (12 < hrs) {
 +
apm="<font size='-1'>pm</font>";
 +
hrs-=12;
 +
}
 +
 +
else {
 +
apm="<font size='-1'>am</font>";
 +
}
 +
 +
if (hrs == 0) hrs=12;
 +
if (hrs<=9) hrs="0"+hrs;
 +
if (min<=9) min="0"+min;
 +
if (sec<=9) sec="0"+sec;
 +
 +
if(navigator.appName == "Netscape") {
 +
document.clock.document.write(tags_before_clock+hrs+col+min+col+sec+apm+spc+tags_middle_clock+spc+day+com+spc+date+ender+spc+month+com+spc+year+tags_after_clock);
 +
document.clock.document.close();
 +
}
 +
 +
if (navigator.appVersion.indexOf("MSIE") != -1){
 +
clock.innerHTML = tags_before_clock+hrs+col+min+col+sec+apm+spc+tags_middle_clock+spc+day+com+spc+date+ender+spc+month+com+spc+year+tags_after_clock;
 +
}
 +
}
 +
 +
setInterval("upclock()",1000);
 +
//-->
 +
</script>
 +
</html>

Revision as of 07:11, 27 October 2008


Contents

Parameter aD analysis

In the following graphs, the red line represents the production of Lysis when both Autoinducer 2 and Iron ions are present. The blue line represents the graphs when only Autoinducer 2 is present.

Changing aD, nD=1

Graph of aD=0.00001

Graph of aD=0.00001

Graph of aD=0.001

Graph of aD=0.001

Graph of aD=0.01

Graph of aD=0.01

We observe that when nD = 1, changing aD has no significant effect to Lysis protein production. Also there seems to be no difference between the two forms of Lysis protein production even under different situations.

Changing aD, nD=10

Graph of aD=0.0001

Graph of aD=0.0001

Graph of aD=0.001

Graph of aD=0.001

The graph presents a range of values aD can take on when nD = 10. As we can see, changing the values of aD has no effect on Lysis protein production as well. The difference between the Lysis protein production under the two different circumstances is now more obvious.


Changing aD, nD=100

Graph of aD=0.0001

Graph of aD=0.0001

Graph of aD=0.001

Graph of aD=0.001

Graph of aD=0.01

Graph of aD=0.01

Here the difference in Lysis protein production is more pronounced and obvious. We understand from these different trends that aD has little or no significant impact on protein production and that nD will be the main deciding factor.