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Team:UC Berkeley Tools/Notebook/Matthew's Notebook
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Even more functionality being added! Nearly finished with the enzyme library, need to finish figuring out the highlighting algorithms, but otherwise it's coming along nicely. I'll be working on integrating a lot of the basic DNA-related functions (reverse complementing, finding ORFs, calculating GC content and melting temp) later today. | Even more functionality being added! Nearly finished with the enzyme library, need to finish figuring out the highlighting algorithms, but otherwise it's coming along nicely. I'll be working on integrating a lot of the basic DNA-related functions (reverse complementing, finding ORFs, calculating GC content and melting temp) later today. | ||
| - | [[Image:ClothoEnzymeLib.jpg|center|frame|Example of the Clotho Enzyme Library interface. (In case you were wondering, that is the team | + | [[Image:ClothoEnzymeLib.jpg|center|frame|Example of the Clotho Enzyme Library interface. (In case you were wondering, that is the team wiki in the background!)]] |
==Questions or Comments: Shoutbox== | ==Questions or Comments: Shoutbox== | ||
Revision as of 22:15, 16 June 2008
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Contents |
Personal Info
Name: Matthew L.E. Johnson
Position: Team member, UC_Berkeley_Tools
Supervisor: Doug Densmore
Lab coworkers: Nade Sritanyaratana, Anne Vandevender
Log
June 3rd, 2008
Just received access to the wiki! Today was the first day of coding, and for me it was mostly re-familiarizing myself with Java and Swing components. We're making good progress, and if we can keep this up this amount of effort, I think we'll have something really neat to share.
June 9th, 2008
Working on implementing various features already offered in ApE, including finding the melting point of a short strand of duplex DNA.
June 16th, 2008
Even more functionality being added! Nearly finished with the enzyme library, need to finish figuring out the highlighting algorithms, but otherwise it's coming along nicely. I'll be working on integrating a lot of the basic DNA-related functions (reverse complementing, finding ORFs, calculating GC content and melting temp) later today.
Questions or Comments: Shoutbox
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