EPF-Lausanne/15 September 2008
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+ | |||
+ | ==Sequencing== | ||
+ | |||
+ | Before sending the plasmids for sequencing we test our primers by PCR. | ||
+ | |||
+ | PCR on AB with: | ||
+ | |||
+ | *pSB1A2 FW, I1466RV | ||
+ | *AB1seqFW, I1466RV | ||
+ | *AB2seqFW,LacImRV | ||
+ | *R0071FW,pSB1A2RV | ||
+ | |||
+ | PCR on CD with: | ||
+ | |||
+ | *pSB1A2FW, C0040RV | ||
+ | *CD1FW, C0040RV | ||
+ | *R0040FW, BB3 | ||
+ | *R0040FW, pSB1A2RV | ||
+ | |||
+ | '''Results:''' | ||
+ | |||
+ | --> image of PCR/gel page 102 | ||
+ | |||
+ | All results were as expected except for AB lane 3, i.e. AB2seqFW, LacImRV | ||
+ | |||
+ | A new PCR is done for these primers, where the annealing temperature is reduced to 53°C. | ||
+ | This turns out to work. |
Revision as of 10:02, 27 October 2008
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Sequencing
Before sending the plasmids for sequencing we test our primers by PCR.
PCR on AB with:
- pSB1A2 FW, I1466RV
- AB1seqFW, I1466RV
- AB2seqFW,LacImRV
- R0071FW,pSB1A2RV
PCR on CD with:
- pSB1A2FW, C0040RV
- CD1FW, C0040RV
- R0040FW, BB3
- R0040FW, pSB1A2RV
Results:
--> image of PCR/gel page 102
All results were as expected except for AB lane 3, i.e. AB2seqFW, LacImRV
A new PCR is done for these primers, where the annealing temperature is reduced to 53°C. This turns out to work.