Team:UC Berkeley Tools/Notebook/Nade's Notebook

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Revision as of 00:57, 15 January 2009

Nade hard at work. Sort of.

This is the notebook of Nade Sritanyaratana. I got involved in iGEM through word of my instructor. I am a 4th year undergraduate at UC Berkeley in Bioengineering with a concentration in imaging, and I hope to apply for a PhD graduate program in the upcoming year. My prior research experience consists of working with bioengineering professor Steven Conolly in the summer and fall of 2007. Beyond imaging, my academic interests include biomechanics; signals and systems; circuit analysis; systems biology; and linear optimization.

My primary role as a Tools Team member is to produce connections to plug into Clotho's core infrastructure; that is, to make functional tools that communicate with Clotho's "command center". Clotho is a project that my post-doc, Doug Densmore, had initiated as one of his side projects. It implements his notion of Platform-Based Design, which involves the optimal interaction between the Application-space and Architecture-space of a program (see [http://biocad-server.eecs.berkeley.edu/wiki/index.php/Platform_Based_Design Platform Based Design] in more detail). This notebook will be used to document any noteworthy updates on my progress in the UCB Tools Team.

EDIT: As of after iGEM and the start of Spring 2009, the purpose of this notebook has now changed.

Personal Info

Name: Nade Sritanyaratana

Position: Team member, UC_Berkeley_Tools

Supervisor: Doug Densmore

Lab coworkers: Matthew Johnson, Anne Van Devender

Contact: Nadesri@berkeley.edu

Log

Click here to access archived iGEM logs.

January 8, 2009: This notebook's new purpose

For some time now, I have misplaced my iGEM (paper) notebook. I realize getting another notebook may only end up with me losing it once again. So I hereby declare that all my thoughts will go here, on my WIKI notebook.

The first thing I need to do is figure out this xml deal to give the parts manager more flexibility.

The second thing I must do it reconstruct what Anderson and Josh wanted me to do with the Parts Manager. I forgot their entire scheme with ctrl+click, shift+click, etc. I'll hold a meeting with them to do this.

That's all that comes to mind right now. Hopefully I finish the xml deal by the 15th. I'll keep posted.

@@ Line 35: / Line 35: @@
 That's all that comes to mind right now. Hopefully I finish the xml deal by the 15th. I'll keep posted.
-==My Wiki How-to==
-===Uploading and displaying images===
-Here's where I first learned how to upload images: [[Team:Hawaii/Wiki_Help]]
-Props to Hawaii team!
-More information was found at [http://en.wikipedia.org/wiki/Wikipedia:How_to_edit_a_page#Links_and_URLs Wikipedia: How to edit a page]
-If you're having trouble first uploading an image, click your edit link, (LITERALLY) type in <nowiki> [[Image: imagename.jpg]] </nowiki> where you want the image, save the page, and you'll find the upload link back on the edited page! You can add modifiers to the image, as found on the Hawaii team and wiki links above.
-===How to link to other pages===
-I found how to post links at "How to edit a page" (see my "Uploading and displaying images" above). There's also a built-in button on top of the text view when editing a page for posting links.
-====Internal links====
-{| border = "1"
-|-
-! width="100" align="left" | Instructions:
-| width="300" | For urls within igem 2008, you can type in: || width="300" | <nowiki>[[The pathname that follows after "title="]]</nowiki>
-|-
-! align="left" | Example:
-| For the Hawaii Wiki Help page, I typed: || <nowiki>[[Team:Hawaii/Wiki_Help]]</nowiki>
-|}
-====External links====
-{| border="1" cellpadding="2"
-|-
-|width="100pt"|<b>Instructions:</b>
-|width="300pt"|For outside links, you can type:
-|width="150pt"|<nowiki>[url [space] name]</nowiki>
-|-
-|<b>Example: </b>|| i.e., for the "Wiki: How to edit a page", I typed: || <nowiki>[http://en.wikipedia.org/wiki/Wikipedia:How_to_edit_a_page#Links_and_URLs Wikipedia: How to edit a page]</nowiki>.
-|}
-That name modifier works as well for the local page format.