Team:Warsaw/Calendar-Main/11 July 2008
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- | < | + | <h3>Preparation of constructs with OmpA protein fusions</h3> |
- | + | <p><ol> | |
- | + | <li> Colony PCR on colonies from plates with transformations OmpA_alpha. </li> | |
- | + | <li> Confirmed transformant colonies inoculated to liquid LB with kanamycin.</li> | |
- | + | </ol></p> | |
- | + | <h3>Cloning of protein Z DNA to OmpA constructs</h3> | |
- | < | + | <p> 2 colonies was inoculated to liquid LB broth with kanamycin</p> |
- | + | <h3>Preparation of construct omega-A</h3> | |
+ | <p><ol> | ||
+ | <li> PCR A in 50 µl<br> | ||
template DNA - pKS-A4 1 µl<br> | template DNA - pKS-A4 1 µl<br> | ||
primer <html> | primer <html> | ||
- | <a href="https://2008.igem.org/Wiki/Team:Warsaw/primers#AP+NotI_N">AP+NotI_N</a | + | <a href="https://2008.igem.org/Wiki/Team:Warsaw/primers#AP+NotI_N">AP+NotI_N</a> - 2 µl<br> |
- | primer | + | primer |
- | <a href="https://2008.igem.org/Wiki/Team:Warsaw/primers#AL+link10+homo2_N">AL+link10+homo2_N</a | + | <a href="https://2008.igem.org/Wiki/Team:Warsaw/primers#AL+link10+homo2_N">AL+link10+homo2_N</a> - 2 µl<br> |
- | Pfu polymerase buffer + | + | Pfu polymerase buffer + Mg<sup>2+</sup> (from Fermentas) - 5 µl<br> |
dNTPs - 1 µl <br> | dNTPs - 1 µl <br> | ||
Pfu turbo - 0.5 µl<br> | Pfu turbo - 0.5 µl<br> | ||
H2o - 38.5 µl<br> | H2o - 38.5 µl<br> | ||
<br> | <br> | ||
- | + | Program:<br> | |
- | + | <ol> | |
- | + | <li> 95°C 3'</li> | |
- | + | <li> 95°C 30"</li> | |
- | + | <li>62°C 45"</li> | |
- | + | <li>72°C 45"</li> | |
- | + | <li>72°C 10'</li> | |
- | < | + | <li>keeping in 4°C</li></ol> |
- | + | </li> | |
+ | <li> PCR omega in 50 µl<br> | ||
template DNA - pUC19 1 µl<br> | template DNA - pUC19 1 µl<br> | ||
primer OmegaLS - 2 µl<br> | primer OmegaLS - 2 µl<br> | ||
primer AOmegaPli - 2 µl<br> | primer AOmegaPli - 2 µl<br> | ||
- | Pfu polymerase buffer + | + | Pfu polymerase buffer + Mg<sup>2+</sup> (from Fermentas) - 5 µl<br> |
dNTPs - 1 µl <br> | dNTPs - 1 µl <br> | ||
Pfu turbo - 0.5 µl<br> | Pfu turbo - 0.5 µl<br> | ||
H2o - 38.5 µl<br> | H2o - 38.5 µl<br> | ||
- | <br> | + | |
- | + | Program:<br> | |
- | + | <ol> | |
- | + | <li> 95°C 3'</li> | |
- | + | <li> 95°C 30"</li> | |
- | + | <li> 62°C 45"</li> | |
- | + | <li> 72°C 45"</li> | |
- | + | <li> 72°C 10'</li> | |
+ | <li> keeping in 4°C</li></ol> | ||
25 cycles | 25 cycles | ||
- | < | + | </li> |
- | + | <li> Gel electrophoresis</li> | |
- | < | + | |
- | + | <li>Reisolation from agarose gel</li> | |
+ | </ol> | ||
</p> | </p> | ||
- | + | </html> | |
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{{WarNotebookEnd}} | {{WarNotebookEnd}} |
Revision as of 17:49, 1 October 2008
Preparation of constructs with OmpA protein fusions
Cloning of protein Z DNA to OmpA constructs2 colonies was inoculated to liquid LB broth with kanamycin Preparation of construct omega-A
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