Team:Warsaw/Calendar-Main/22 July 2008
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<li>2 selected clones were send to DNA sequencing lab</li> | <li>2 selected clones were send to DNA sequencing lab</li> | ||
</ol> | </ol> | ||
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+ | <h3>Cloning of protein Z DNA to pET15b-OmpA-omega in place of OmpA<br> | ||
+ | Paweł</h3> | ||
+ | <p><ol><li><a href=https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#plasmid_DNA_isolation>Isolation</a> of plasmids from cultures inocluated on previous day</li> | ||
+ | <li>Control <a href=https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#digest>digest</a> of isolated plasmids with NdeI and NotI. Zero positive results obtained - just empty vectors</li> | ||
+ | <li>Another overnight <a href=https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#ligation>ligation</a> of pET15b-OmpA-omega (NdeI/NotI cutted) with protein Z DNA</li> | ||
+ | </ol></p> | ||
+ | |||
+ | <h3>Cloning omega-A fusion on pKS (second attempt)</h3> | ||
+ | <h4>Michał L., Ewa, Marcin:</h4> | ||
+ | <ol> | ||
+ | <li>Since the phage is gone we can continue this cloning:</li> | ||
+ | <li>Restriction digest of PCL product and pKS vector with SacI and NotI</li> | ||
+ | <li>Ligation of omega-A fusion with pKS vector</li> | ||
+ | <li>Transformation of Top10 with ligation product</li> | ||
+ | |||
+ | </ol> | ||
+ | |||
+ | <h3>Cloning of protein A DNA to OmpA constructs</h3> | ||
+ | <p><ol> | ||
+ | <li> <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#digest">Digest</a> of pKS-A plasmid, pACYC177+OmpA_omega and pACYC177+OmpA_alpha with NotI and SacI (pACYC177 were also dephosporylated with CIAP)</li> | ||
+ | <li> Gel electrophoresis and <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#DNA_isolation_from_agarose_gel">gel-out</a> of proper bands (420 bp - pKS-A lane, 4050 bp - pACYC177+OmpA_omega lane and 4300 bp pACYC177+OmpA_alpha lane). </li> | ||
+ | <li> <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#ligation">Ligation</a> of A DNA fragment with both pACYC177 vectors.</li> | ||
+ | <li> Transformation of <i>E. coli</i> <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">TOP10</a> strain with ligations. </li> | ||
+ | <li>Transformants plating on LB + kanamycin. </li></ol> | ||
+ | </p> | ||
+ | <h3>Cloning of protein Z DNA to OmpA constructs<br>Michał K.</h3> | ||
+ | <p><ol> | ||
+ | <li> Isolation of plasmids from cultures inocluated on previous day (pACYC177+OmpA_Z_alpha). </li> | ||
+ | <li> Control <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#digest">digest</a> of isolated plasmids with BamHI and SacI (we found 4 good clones).</li></ol></p> | ||
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+ | </html> | ||
Revision as of 17:58, 11 October 2008
Cloning of protein A DNA to OmpA constructs
Cloning of protein Z DNA to pET15b-OmpA-omega in place of OmpA
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