Template:Team:UC Berkeley/Notebook/AL sequencing

From 2008.igem.org

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| AL127 || || || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL127 | AL127]]
| AL127 || || || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL127 | AL127]]
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|-
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| AL128 || 8-31-2008 || akl005-2 || Clone #2 || Oligo ca998 and g00101|| || [[Team:UC Berkeley/Notebook/AL/AL128 | AL128]]
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| AL128 || 8-31-2008 || akl005-2 || Clone #2 || Oligo ca998 and g00101|| Perfect || [[Team:UC Berkeley/Notebook/AL/AL128 | AL128]]
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|-
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| AL129 || 8-31-2008 || akl005-3 || Clone #3 || Oligo ca998 and g00101|| || [[Team:UC Berkeley/Notebook/AL/AL129 | AL129]]
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| AL129 || 8-31-2008 || akl005-3 || Clone #3 || Oligo ca998 and g00101|| Perfect || [[Team:UC Berkeley/Notebook/AL/AL129 | AL129]]
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| AL130 || || || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL130 | AL130]]
| AL130 || || || || Oligo ca998 || || [[Team:UC Berkeley/Notebook/AL/AL130 | AL130]]
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|}

Revision as of 00:33, 12 October 2008

[http://andersonlab.qb3.berkeley.edu/SeqLogTemplate.xls Excel Template for Sequencing Logs]

Read Date plasmid Clone Oligo Result File
AL001 6-16-2008 pBca1256-K112300 Clone #1 Oligo ca998 Perfect AL001
AL002 6-16-2008 pBca1256-K112301 Clone #1 Oligo ca998 Perfect AL002
AL003 6-16-2008 pBca1256-K112302 Clone #1 Oligo ca998 Perfect AL003
AL004 6-16-2008 pBca1256-K112303 Clone #1 Oligo ca998 Point Mutation AL004
AL005 6-16-2008 pBca1256-K112304 Clone #1 Oligo ca998 Perfect AL005
AL006 6-16-2008 pBca1256-K112305 Clone #1 Oligo ca998 Bad Read AL006
AL007 6-16-2008 pBca1256-K112306 Clone #1 Oligo ca998 Perfect AL007
AL008 6-16-2008 pBca1256-K112307 Clone #1 Oligo ca998 Point Mutation AL008
AL009 6-16-2008 pBca1256-K112308 Clone #1 Oligo ca998 Perfect AL009
AL010 6-16-2008 pBca1256-K112309 Clone #1 Oligo ca998 Perfect AL010
AL011 6-16-2008 pBca1256-K112310 Clone #1 Oligo ca998 Point Mutation AL011
AL012 6-16-2008 pBca1256-K112311 Clone #1 Oligo ca998 Bad Read AL012
AL013 6-16-2008 pBca1256-K112312 Clone #1 Oligo ca998 Perfect AL013
AL014 6-16-2008 pBca1256-K112313 Clone #1 Oligo ca998 Point Mutation AL014
AL015 6-16-2008 pBca1256-K112314 Clone #1 Oligo ca998 Other sequence AL015
AL016 6-16-2008 pBca1256-K112315 Clone #1 Oligo ca998 Perfect AL016
AL017 6-16-2008 pBca1256-K112316 Clone #1 Oligo ca998 Bad Read AL017
AL018 6-16-2008 pBca1256-K112317 Clone #1 Oligo ca998 Perfect AL018
AL019 6-16-2008 pBca1256-K112318 Clone #1 Oligo ca998 Perfect AL019
AL020 6-16-2008 pBca1256-K112319 Clone #1 Oligo ca998 Other Sequence AL020
AL021 6-16-2008 pBca1256-K112320 Clone #1 Oligo ca998 Short Read/Point Mutation AL021
AL022 6-18-2008 pBca1256-K112303 Clone #2 Oligo ca998 Perfect AL022
AL023 6-18-2008 pBca1256-K112305 Clone #2 Oligo ca998 Other sequence AL023
AL024 6-18-2008 pBca1256-K112307 Clone #2 Oligo ca998 Perfect AL024
AL025 6-18-2008 pBca1256-K112310 Clone #2 Oligo ca998 Other Sequence AL025
AL026 6-18-2008 pBca1256-K112311 Clone #2 Oligo ca998 Other Sequence AL026
AL027 6-18-2008 pBca1256-K112313 Clone #2 Oligo ca998 Other Sequence AL027
AL028 6-18-2008 pBca1256-K112314 Clone #2 Oligo ca998 Perfect AL028
AL029 6-18-2008 pBca1256-K112316 Clone #2 Oligo ca998 Other Sequence AL029
AL030 6-18-2008 pBca1256-K112319 Clone #2 Oligo ca998 Perfect AL030
AL031 6-18-2008 pBca1256-K112320 Clone #2 Oligo ca998 Perfect AL031
AL032 6-20-2008 pBca1256-K112305 Clone #3 Oligo ca998 Perfect AL032
AL033 6-20-2008 pBca1256-K112310 Clone #3 Oligo ca998 Perfect AL033
AL034 6-20-2008 pBca1256-K112311 Clone #3 Oligo ca998 Point Mutation and Deletion AL034
AL035 6-20-2008 pBca1256-K112313 Clone #3 Oligo ca998 Point Mutation AL035
AL036 6-20-2008 pBca1256-K112316 Clone #3 Oligo ca998 Other Sequence AL036
AL037 6-24-2008 pBca1256-K112311 Clone #4 Oligo ca998 Point Mutation AL037
AL038 6-24-2008 pBca1256-K112313 Clone #4 Oligo ca998 Perfect AL038
AL039 6-24-2008 pBca1256-K112316 Clone #4 Oligo ca998 Point mutation in EcoRI site AL039
AL040 6-24-2008 pBca1256-K112319 Clone #1 Oligo ca998 Perfect AL040
AL041 6-24-2008 pBca1256-K112319 Clone #2 Oligo ca998 Perfect AL041
AL042 6-26-2008 pBca1256-K112311 Clone #5 Oligo ca998 Deletion and point mutation AL042
AL043 6-26-2008 pBca1256-K112311 Clone #6 Oligo ca998 Deletion AL043
AL044 6-27-2008 pBca1256-K112311 Clone #7 Oligo ca998 Deletion AL044
AL045 6-29-2008 pBca1256-K112311 Clone #8 Oligo ca998 Perfect AL045
AL046 6-29-2008 pBca1256-K112311 Clone #9 Oligo ca998 Perfect AL046
AL047 6-29-2008 pBca1256-K112311 Clone #10 Oligo ca998 Did not work AL047
AL048 7-06-2008 K112321 Clone #1 Oligo ca998 Did not work AL048
AL049 7-06-2008 K112321 Clone #2 Oligo ca998 Point Mutation in C-terminus AL049
AL050 7-06-2008 K112322 Clone #1 Oligo ca998 Perfect AL050
AL051 7-06-2008 K112322 Clone #2 Oligo ca998 Perfect AL051
AL052 Jin's Sequence Oligo ca998 AL052
AL053 Jin's Sequence Oligo ca998 AL053
AL054 7-12-2008 K112323 Clone #1 Oligo ca998 Some Deletions/Point Mutation Possibly from sequencing AL054
AL055 7-12-2008 K112323 Clone #2 Oligo ca998 Perfect AL055
AL056 7-22-2008 K112319 Clone #3 Oligo ca998 Turn out to be ftsAz AL056
AL057 7-19-2008 akl004 Clone #1 Oligo ca998 Lefty is a~pelB AL057
AL058 7-19-2008 Clone #1 Oligo ca998 and g00101 Lefty is a~pelB AL058
AL059 7-22-2008 akl008 Clone #1 Oligo ca998 no lefty part AL059
AL060 7-22-2008 akl007 Clone #1 Oligo ca998 wrong K112607 AL060
AL061 7-22-2008 akl010 Clone #1 Oligo ca998 wrong K112607 AL061
AL062 7-22-2008 Bca1092 A/K Clone #1 Oligo ca998 Perfect AL062
AL063 7-23-2008 K112230 A/K Clone #1 Oligo ca998 Sequence is a~pelB AL063
AL064 7-23-2008 K112608 Clone #1 Oligo ca998 Perfect (but not what we want) AL064
AL065 7-24-2008 Bca1109 Clone #1 Oligo ca998 Some Mutations but should still work AL065
AL066 7-24-2008 pBCa1256-K112229 Clone #1 Oligo ca998 Perfect AL066
AL067 7-25-2008 akl005 Clone #1 Oligo ca998 Multiple Templates AL067
AL068 7-24-2008 akl009 Clone #1 Oligo ca998 Wrong rbs_lamB> righty could be rbs pelB AL068
AL069 7-25-2008 Bca1106-A K/C Clone #1 Oligo ca998 Bad Read AL069
AL070 7-24-2008 akl008 Clone #2 Oligo ca998 {rbs_lamB>} wrong AL070
AL071 7-25-2008 Bca1109 Clone #1 Oligo g00101 Perfect AL071
AL072 7-25-2008 pBca1256-K112319 Clone #4 Oligo ca998 Perfect AL072
AL073 7-25-2008 akl002 Clone #1 Oligo ca998 Perfect AL073
AL074 7-26-2008 akl005 Clone #2 Oligo ca998 and g00101Multiple Templates AL074
AL075 7-29-2008 akl001 Clone #1 Oligo ca998 and g00101Perfect AL075
AL076 7-28-2008 Oligo ca998 AL076
AL077 Oligo ca998 AL077
AL078 Oligo ca998 AL078
AL079 Oligo ca998 AL079
AL080 Oligo ca998 AL080
AL081 Oligo ca998 AL081
AL082 Oligo ca998 AL082
AL083 Oligo ca998 AL083
AL084 Oligo ca998 AL084
AL085 Oligo ca998 AL085
AL086 Oligo ca998 AL086
AL087 Oligo ca998 AL087
AL088 Oligo ca998 AL088
AL089 Oligo ca998 AL089
AL090 Oligo ca998 AL090
AL091 Oligo ca998 AL091
AL092 Oligo ca998 AL092
AL093 Oligo ca998 AL093
AL094 Oligo ca998 AL094
AL095 Oligo ca998 AL095
AL096 Oligo ca998 AL096
AL097 Oligo ca998 AL097
AL098 Oligo ca998 AL098
AL099 Oligo ca998 AL099
AL100 Oligo ca998 AL100
AL101 Oligo ca998 AL101
AL102 Oligo ca998 AL102
AL103 Oligo ca998 AL103
AL104 Oligo ca998 AL104
AL105 Oligo ca998 AL105
AL106 Oligo ca998 AL106
AL107 Oligo ca998 AL107
AL108 Oligo ca998 AL108
AL109 Oligo ca998 AL109
AL110 Oligo ca998 AL110
AL111 Oligo ca998 AL111
AL112 Oligo ca998 AL112
AL113 Oligo ca998 AL113
AL114 Oligo ca998 AL114
AL115 Oligo ca998 AL115
AL116 Oligo ca998 AL116
AL117 Oligo ca998 AL117
AL118 Oligo ca998 AL118
AL119 Oligo ca998 AL119
AL120 Oligo ca998 AL120
AL121 Oligo ca998 AL121
AL122 Oligo ca998 AL122
AL123 Oligo ca998 AL123
AL124 Oligo ca998 AL124
AL125 Oligo ca998 AL125
AL126 Oligo ca998 AL126
AL127 Oligo ca998 AL127
AL128 8-31-2008 akl005-2 Clone #2 Oligo ca998 and g00101 Perfect AL128
AL129 8-31-2008 akl005-3 Clone #3 Oligo ca998 and g00101 Perfect AL129
AL130 Oligo ca998 AL130
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