Team:Warsaw/Calendar-Main/11 August 2008

From 2008.igem.org

(Difference between revisions)
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[photo of the gel is to be placed here]
[photo of the gel is to be placed here]
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<h3>Checking whether degradation of the fusions with OmpA is caused by Lon and OmpT proteases (present in <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">TOP10</a>)</h3>
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<h4>Piotr</h4>
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<p>
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Test was conducted in <i>E.coli</i> <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#rosetta">Rosetta</a> strain expressing omp_omega_A_alfa (with and without induction) and omp_A_alfa.
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<ol>
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<li>Spinnign</li>
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<li>Suspending</li>
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<li>Adding of lysis buffer</li>
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<li>Boiling</li>
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<li>Putting into poliacrylamide gel</li>
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<li>Transfer onto nitrocellulose</li>
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<li>Blocking</li>
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<li>Anti-A antibody binding</li>
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<li>Washing</li>
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<li>Anti-rabbit antibody binding</li>
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<li>Developing with BCIP and NBT</li>
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</ol>
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</p>
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[photo of the gel is to be placed here]
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<p>We didn't observe differences in espression and degradation in <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#rosetta">Rosettas</a> nor in <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">TOP10</a>. Therefore we suppose that degradation of the fusions is caused by other factor than Lon and OmpT proteases.</p>

Revision as of 13:33, 12 October 2008

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Checking for presence of A on the cell membrane
Piotr

  1. Pouring bacteria by drops onto nitrocellulose
  2. Drying
  3. Blocking
  4. Anti-A antibody binding
  5. Washing
  6. Anti-rabbit antibody binding
  7. Developing with BCIP and NBT

[photo of the gel is to be placed here]

Checking whether degradation of the fusions with OmpA is caused by Lon and OmpT proteases (present in TOP10)

Piotr

Test was conducted in E.coli Rosetta strain expressing omp_omega_A_alfa (with and without induction) and omp_A_alfa.

  1. Spinnign
  2. Suspending
  3. Adding of lysis buffer
  4. Boiling
  5. Putting into poliacrylamide gel
  6. Transfer onto nitrocellulose
  7. Blocking
  8. Anti-A antibody binding
  9. Washing
  10. Anti-rabbit antibody binding
  11. Developing with BCIP and NBT

[photo of the gel is to be placed here]

We didn't observe differences in espression and degradation in Rosettas nor in TOP10. Therefore we suppose that degradation of the fusions is caused by other factor than Lon and OmpT proteases.