Team:UC Berkeley Tools/Development

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(Difference between revisions)
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==Clotho Beta: Future Development==
==Clotho Beta: Future Development==
===New Features===
===New Features===
-
* New design views to supplement the Sequence View and allow easier designing of basic and composite BioBrick parts.
+
* New design views to supplement the Sequence View and allow easier designing of basic and composite BioBrick parts
* Ability to interface with devices, including robots that can be used for automated production of parts designed in Clotho.
* Ability to interface with devices, including robots that can be used for automated production of parts designed in Clotho.
[[Image:Biomek3000.jpg|200 px|A Biomek 3000 Pippeting Robot]]
[[Image:Biomek3000.jpg|200 px|A Biomek 3000 Pippeting Robot]]
===Improved Features:===
===Improved Features:===
-
* More Database support (systems like [http://brickit.wiki.sourceforge.net/ BrickIt!])
+
* More database support (systems like [http://brickit.wiki.sourceforge.net/ BrickIt!])
-
*
+
* Improved Plug-in environment that allows users to add even more expanded functionality to Clotho
 +
 
==Helping Out In The Lab: Assembly Algorithms==
==Helping Out In The Lab: Assembly Algorithms==
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PoBoL stands for "Provisional BioBrick Language", and is the name given to a technical standard for BioBrick data in synthetic biology databases.  Put simply, our implementation of PoBoL
PoBoL stands for "Provisional BioBrick Language", and is the name given to a technical standard for BioBrick data in synthetic biology databases.  Put simply, our implementation of PoBoL
-
For more information on the PoBoL standard, check out [http://www.pobol.org/]
+
[[Image:PoBoLDiagram.png]]
 +
 
 +
For more information on the PoBoL standard, check out [http://www.pobol.org/ www.pobol.org]
==Increasing Collaboration Through Better Access To Database==
==Increasing Collaboration Through Better Access To Database==
Through a combination of PoBoL
Through a combination of PoBoL

Revision as of 08:56, 24 October 2008

Clotho Title small.png


Contents

Clotho Beta: Future Development

New Features

  • New design views to supplement the Sequence View and allow easier designing of basic and composite BioBrick parts
  • Ability to interface with devices, including robots that can be used for automated production of parts designed in Clotho.

A Biomek 3000 Pippeting Robot

Improved Features:

  • More database support (systems like [http://brickit.wiki.sourceforge.net/ BrickIt!])
  • Improved Plug-in environment that allows users to add even more expanded functionality to Clotho


Helping Out In The Lab: Assembly Algorithms

  • Using the assembly algorithms, helped

PoBoL: BioBrick Data Sharing Made Easy

PoBoL stands for "Provisional BioBrick Language", and is the name given to a technical standard for BioBrick data in synthetic biology databases. Put simply, our implementation of PoBoL

PoBoLDiagram.png

For more information on the PoBoL standard, check out [http://www.pobol.org/ www.pobol.org]

Increasing Collaboration Through Better Access To Database

Through a combination of PoBoL