Team:Paris/Modeling/Workflow Example
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| First, we consider the complexations ''FlhDC><pFliL'' and ''FlhDC><pFliL'' : | | First, we consider the complexations ''FlhDC><pFliL'' and ''FlhDC><pFliL'' : | ||
|[[Team:Paris/Modeling/Specific_Hypothesis#Hexamere|''FlhD<sub>4</sub>C<sub>2</sub>'' → ''FlhDC'']] <br> | |[[Team:Paris/Modeling/Specific_Hypothesis#Hexamere|''FlhD<sub>4</sub>C<sub>2</sub>'' → ''FlhDC'']] <br> | ||
+ | [[Team:Paris/Modeling/General_Hypothesis#Complexations#Elementary_Reaction|Quasi Steady-State]] <br> | ||
[[Team:Paris/Modeling/General_Hypothesis#Complexations#Hill_Type|"Hill Type" complexation]] <br> | [[Team:Paris/Modeling/General_Hypothesis#Complexations#Hill_Type|"Hill Type" complexation]] <br> | ||
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- | | | + | |[[Image:complexation.jpg]] |
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- | | | + | | Then, we consider the resulting activation of ''pFliL'' : |
+ | |[[Team:Paris/Modeling/General_Hypothesis#Transduction_Rate|Transduction Rate β]] <br> | ||
+ | [[Team:Paris/Modeling/Specific_Hypothesis#SUM|"Sum Logical Gate"]] <br> | ||
+ | |- | ||
+ | |[[Image:activation]] | ||
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Revision as of 16:14, 25 October 2008
Generic Workflow on an Example
Here, we will explain the generic protocole that leads to the caracterisation of one of the steps of the system. The choosen example is the EXPRESSION of the PROMOTER pFliL in function of the TRANSCRIPTION FACTORS FlhDC and FliA. We know that the hexamere FlhD4C2 and the protein FliA act both on the promoter pFliL as inducers... how do we evaluate this action ?
First, we consider the complexations FlhDC><pFliL and FlhDC><pFliL : | FlhD4C2 → FlhDC |
File:Complexation.jpg | |
Then, we consider the resulting activation of pFliL : | Transduction Rate β |
File:Activation | |