Team:Warsaw/Calendar-Main/10 July 2008

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<li> Control <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#digest">digest</a> of isolated plasmids with BamHI and NotI (BamHI buffer).  
<li> Control <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#digest">digest</a> of isolated plasmids with BamHI and NotI (BamHI buffer).  
</li>
</li>
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<li> Gel electrophoresis <a href="https://2008.igem.org/Team:Warsaw/Calendar-Main/10_July_2008#fig1">Fig. 1</a> - we confirmed <a href="https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-omega">pACYC177 + OmpA_omega</a>. We didn't obtain <a href="https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-alpha">pACYC177 + OmpA_alpha</a> probably because of a mistake in plating. </li>
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<li> Gel electrophoresis <a href="https://2008.igem.org/Team:Warsaw/Calendar-Main/10_July_2008#fig1">Fig. 1.</a> - we confirmed <a href="https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-omega">pACYC177 + OmpA_omega</a>. We didn't obtain <a href="https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-alpha">pACYC177 + OmpA_alpha</a> probably because of a mistake in plating. </li>
<li> <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#ligation">Ligation</a> of <a href="https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177">pACYC177</a> and OmpA_alpha (1 hr).</li>
<li> <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#ligation">Ligation</a> of <a href="https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177">pACYC177</a> and OmpA_alpha (1 hr).</li>
<li> Transformation of <i>E. coli</i> <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">TOP10</a> strain with ligation products: <a href="https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-alpha">pACYC177 and OmpA_alpha</a>.</li>
<li> Transformation of <i>E. coli</i> <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">TOP10</a> strain with ligation products: <a href="https://2008.igem.org/Wiki/Team:Warsaw/vectors/pACYC177%2BompA-alpha">pACYC177 and OmpA_alpha</a>.</li>
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<a name="fig1"><img src="https://static.igem.org/mediawiki/2008/9/9c/Trawienie_5_th_july.jpg" width=300 /></a><var>Fig. 1. Control BamHI and NotI digests  of plasmids, which were used in successful colony PCRs <b></b><br>  
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<a name="fig1"><img src="https://static.igem.org/mediawiki/2008/9/9c/Trawienie_5_th_july.jpg" width=300 /></a><var><b>Fig. 1. </b>Control BamHI and NotI digests  of plasmids, which were used in successful colony PCRs <b></b><br>  
1. Marker<br>
1. Marker<br>
2. slot 1. from yesterday's Omp_A_alpha colony PCR<br>
2. slot 1. from yesterday's Omp_A_alpha colony PCR<br>

Revision as of 17:43, 26 October 2008

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Preparation of construct pKS with A protein

Michał L., Marcin

  1. Inactivation of digestion enzymes and CIAP.
  2. Ligation of digested PCR product and pKS for 2h at room temperature.
  3. Transformation of E. coli TOP10 strain with 7 µl of ligation mix.
  4. Transformants plating on LB + ampicillin + X-gal + IPTG.

Cloning of protein Z DNA to pET15b-OmpA-alpha in place of OmpA

Piotr, Antoni

  1. Result of ligation of pET15b-OmpA-alpha with protein Z DNA: 16 colonies grown.
  2. Each colony cultured overnight in LB + ampicilin.

Preparation of constructs: OmpA_alpha and OmpA_omega #2

Michał K.

  1. Isolation of plasmids from cultures inocluated on previous day.
  2. Control digest of isolated plasmids with BamHI and NotI (BamHI buffer).
  3. Gel electrophoresis Fig. 1. - we confirmed pACYC177 + OmpA_omega. We didn't obtain pACYC177 + OmpA_alpha probably because of a mistake in plating.
  4. Ligation of pACYC177 and OmpA_alpha (1 hr).
  5. Transformation of E. coli TOP10 strain with ligation products: pACYC177 and OmpA_alpha.
  6. Transformants plating on LB + kanamycin.

Fig. 1. Control BamHI and NotI digests of plasmids, which were used in successful colony PCRs
1. Marker
2. slot 1. from yesterday's Omp_A_alpha colony PCR
2. slot 14. from yesterday's Omp_A_alpha colony PCR
2. slot 4. from yesterday's Omp_A_omega colony PCR
2. slot 10. from yesterday's Omp_A_omega colony PCR