Template:Team:UC Berkeley/Notebook/Molly sequencing

From 2008.igem.org

(Difference between revisions)
(→Molly's Sequencing Log)
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| MEA006 || 06/15/08 || pBca1256-K112207 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA006 | MEA006]]
| MEA006 || 06/15/08 || pBca1256-K112207 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA006 | MEA006]]
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| MEA006 || 06/18/08 || pBca1256-K112207 || 1 || G00101 || Bad reverse read, but good part was perfect with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA006 | MEA006]]
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| MEA007 || 06/15/08 || pBca1256-K112208 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA007 | MEA007]]
| MEA007 || 06/15/08 || pBca1256-K112208 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA007 | MEA007]]
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| MEA007 || 06/18/08 || pBca1256-K112208 || 1 || G00101 || Bad reverse read, but good part was perfect with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA007 | MEA007]]
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| MEA008 || 06/15/08 || pBca1256-K112209 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA008 | MEA008]]
| MEA008 || 06/15/08 || pBca1256-K112209 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA008 | MEA008]]
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| MEA008 || 06/18/08 || pBca1256-K112209 || 1 || G00101 || Bad reverse read, but good part was perfect with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA008 | MEA008]]
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| MEA009 || 06/15/08 || pBca1256-K112210 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA009 | MEA009]]
| MEA009 || 06/15/08 || pBca1256-K112210 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA009 | MEA009]]
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| MEA009 || 06/18/08 || pBca1256-K112210 || 1 || G00101 || Bad reverse read, but good part was perfect with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA009 | MEA009]]
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| MEA010 || 06/15/08 || pBca1256-K112211 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA010 | MEA010]]
| MEA010 || 06/15/08 || pBca1256-K112211 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA010 | MEA010]]
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| MEA010 || 06/18/08 || pBca1256-K112211 || 1 || G00101 || Bad reverse read, but good part was perfect with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA010 | MEA010]]
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| MEA011 || 06/15/08 || pBca1256-K112212 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA011 | MEA011]]
| MEA011 || 06/15/08 || pBca1256-K112212 || 1 || ca998 || Partial read (long part) with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA011 | MEA011]]
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| MEA011 || 06/18/08 || pBca1256-K112212 || 1 || G00101 || Bad reverse read, but good part was perfect with silent mutation from AGG to AGA || [[Team:UC Berkeley/Notebook/MEA/MEA011 | MEA011]]
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| MEA012 || 06/15/08 || pBca1256-K112213 || 1 || ca998 || Perfect || [[Team:UC Berkeley/Notebook/MEA/MEA012 | MEA012]]
| MEA012 || 06/15/08 || pBca1256-K112213 || 1 || ca998 || Perfect || [[Team:UC Berkeley/Notebook/MEA/MEA012 | MEA012]]

Revision as of 21:03, 18 June 2008

Molly's Sequencing Log

Molly's Notebook

Read Date Plasmid Clone # Oligo Result File
MEA001 06/15/08 pBca1256-K112200 1 ca998 Bad read MEA001
MEA002 06/15/08 pBca1256-K112201 1 ca998 Point mutation changing Asn to Lys MEA002
MEA003 06/15/08 pBca1256-K112202 1 ca998 Perfect MEA003
MEA004 06/15/08 pBca1256-K112203 1 ca998 Perfect MEA004
MEA005 06/15/08 pBca1256-K112204 1 ca998 Point mutation changing Asn to Lys MEA005
MEA006 06/15/08 pBca1256-K112207 1 ca998 Partial read (long part) with silent mutation from AGG to AGA MEA006 MEA006 06/18/08 pBca1256-K112207 1 G00101 Bad reverse read, but good part was perfect with silent mutation from AGG to AGA MEA006
MEA007 06/15/08 pBca1256-K112208 1 ca998 Partial read (long part) with silent mutation from AGG to AGA MEA007
MEA007 06/18/08 pBca1256-K112208 1 G00101 Bad reverse read, but good part was perfect with silent mutation from AGG to AGA MEA007
MEA008 06/15/08 pBca1256-K112209 1 ca998 Partial read (long part) with silent mutation from AGG to AGA MEA008
MEA008 06/18/08 pBca1256-K112209 1 G00101 Bad reverse read, but good part was perfect with silent mutation from AGG to AGA MEA008
MEA009 06/15/08 pBca1256-K112210 1 ca998 Partial read (long part) with silent mutation from AGG to AGA MEA009
MEA009 06/18/08 pBca1256-K112210 1 G00101 Bad reverse read, but good part was perfect with silent mutation from AGG to AGA MEA009
MEA010 06/15/08 pBca1256-K112211 1 ca998 Partial read (long part) with silent mutation from AGG to AGA MEA010
MEA010 06/18/08 pBca1256-K112211 1 G00101 Bad reverse read, but good part was perfect with silent mutation from AGG to AGA MEA010
MEA011 06/15/08 pBca1256-K112212 1 ca998 Partial read (long part) with silent mutation from AGG to AGA MEA011
MEA011 06/18/08 pBca1256-K112212 1 G00101 Bad reverse read, but good part was perfect with silent mutation from AGG to AGA MEA011
MEA012 06/15/08 pBca1256-K112213 1 ca998 Perfect MEA012
MEA013 06/15/08 pBca1256-K112214 1 ca998 Perfect MEA013
MEA014 06/15/08 pBca1256-K112215 1 ca998 Perfect MEA014
MEA015 06/15/08 pBca1256-K112216 1 ca998 Bad read in the beginning, re-sequence & pick new colony MEA015
MEA016 06/15/08 pBca1256-K112217 1 ca998 This looks like the sequencing file was switched with that for MEA017 MEA016
MEA017 06/15/08 pBca1256-K112218 1 ca998 This looks like the sequencing file was switched with that for MEA016 MEA017
MEA018 06/15/08 pBca1256-K112221 1 ca998 Perfect MEA018
MEA019 06/15/08 pBca1256-K112222 1 ca998 Perfect MEA019
MEA020 06/15/08 pBca1256-K112225 1 ca998 Perfect MEA020
MEA021 06/15/08 pBca1256-K112226 1 ca998 Perfect MEA021
MEA022 06/15/08 pBca1256-K112227 1 ca998 Perfect MEA022
MEA023 06/15/08 pBca1256-K112228 1 ca998 This finch file aligns with K112229... MEA023
MEA024 06/15/08 pBca1256-K112229 1 ca998 Bad read, re-sequence MEA024
MEA025 06/15/08 pBca1256-K112230 1 ca998 This part aligns with K112228... MEA025
MEA026 Date Plasmid Clone # Oligo Result MEA026
MEA027 Date Plasmid Clone # Oligo Result MEA027
MEA028 Date Plasmid Clone # Oligo Result MEA028
MEA029 Date Plasmid Clone # Oligo Result MEA029
MEA030 Date Plasmid Clone # Oligo Result MEA030
MEA031 Date Plasmid Clone # Oligo Result MEA031
MEA032 Date Plasmid Clone # Oligo Result MEA032
MEA033 Date Plasmid Clone # Oligo Result MEA033
MEA034 Date Plasmid Clone # Oligo Result MEA034
MEA035 Date Plasmid Clone # Oligo Result MEA035
MEA036 Date Plasmid Clone # Oligo Result MEA036
MEA037 Date Plasmid Clone # Oligo Result MEA037
MEA038 Date Plasmid Clone # Oligo Result MEA038
MEA039 Date Plasmid Clone # Oligo Result MEA039
MEA040 Date Plasmid Clone # Oligo Result MEA040
MEA041 Date Plasmid Clone # Oligo Result MEA041
MEA042 Date Plasmid Clone # Oligo Result MEA042
MEA043 Date Plasmid Clone # Oligo Result MEA043
MEA044 Date Plasmid Clone # Oligo Result MEA044
MEA045 Date Plasmid Clone # Oligo Result MEA045
MEA046 Date Plasmid Clone # Oligo Result MEA046
MEA047 Date Plasmid Clone # Oligo Result MEA047
MEA048 Date Plasmid Clone # Oligo Result MEA048
MEA049 Date Plasmid Clone # Oligo Result MEA049
MEA050 Date Plasmid Clone # Oligo Result MEA050
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