Team:Heidelberg/Notebook/Visualization/Notebook/1stweek
From 2008.igem.org
(Difference between revisions)
(→Monday 01/09/2008) |
|||
Line 1: | Line 1: | ||
<html> | <html> | ||
- | <link | + | |
- | + | ||
- | + | <style> | |
+ | h1.firstHeading { display: none; } | ||
+ | |||
+ | p {text-align: justify;} | ||
+ | |||
+ | a:link { color: #00b0e6; text-decoration: none} | ||
+ | a:visited { color:#00b0e6; text-decoration: none} | ||
+ | a:hover { color:#f29400; text-decoration: none} | ||
+ | a:active { color:#f29400; text-decoration: none} | ||
+ | |||
+ | #bodyContent { padding: 10px auto; width: 910px; margin: auto; clear: none; } | ||
+ | |||
+ | table#team_members { text-align: justify; border: 0; } | ||
+ | table#team_members h2, table#team_members h3 { clear: both; } | ||
+ | |||
+ | |||
+ | /*-----------------------------------------------------------------------------------------------*/ | ||
+ | div.MenuBar ul li ul.DropDownMenu { | ||
+ | display: none; /* Hides all drop-down menus. */ | ||
+ | |||
+ | } | ||
+ | /* | ||
+ | li:hover works in IE7 and FF2. | ||
+ | a:hover works in IE6 and FF2. | ||
+ | a:hover breaks li:hover in FF2. | ||
+ | */ | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li ul.SideMenu, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a ul.SideMenu { | ||
+ | display: none; /* Hides all side menus. */ | ||
+ | } | ||
+ | /*------------------------------------------------------------------------------------- Menu Bar */ | ||
+ | div.MenuBar { | ||
+ | font: arial, helvetica, sans-serif; | ||
+ | height: 30px; | ||
+ | width: 910px; | ||
+ | /*width: 100%*/ | ||
+ | margin: 0; | ||
+ | border-top: 0; | ||
+ | border-right: 0; | ||
+ | border-left: 0; | ||
+ | padding: 0; | ||
+ | background: black; | ||
+ | |||
+ | } | ||
+ | div.MenuBar ul { | ||
+ | font: arial, helvetica, sans-serif; | ||
+ | text-align: center; | ||
+ | list-style-type: none; | ||
+ | margin: 0.5em auto; | ||
+ | border: 0; | ||
+ | padding: 0; | ||
+ | background: black; | ||
+ | } | ||
+ | div.MenuBar ul li { | ||
+ | font: arial, helvetica, sans-serif; | ||
+ | display: block; | ||
+ | padding: 0; | ||
+ | margin: 0; | ||
+ | font-size: 1.3em; | ||
+ | float: left; | ||
+ | background: black; | ||
+ | text-align: center; | ||
+ | width: 107px; | ||
+ | position: relative; /* Sets the positioning context for each drop-down menu. */ | ||
+ | } | ||
+ | |||
+ | div.MenuBar ul li a { | ||
+ | font: arial, helvetica, sans-serif; | ||
+ | display: block; | ||
+ | background: black; | ||
+ | height: 22px; /* Keep height + padding-top + padding-bottom sync with the menu bar height. */ | ||
+ | color: #ffffff; | ||
+ | padding-top: 4px; | ||
+ | padding-bottom: 4px; | ||
+ | padding-left: 1em; /* Sets the left space between top-level items. */ | ||
+ | padding-right: 1em; /* Sets the right space between top-level items. */ | ||
+ | text-decoration: none; | ||
+ | } | ||
+ | |||
+ | /*------------------------------------------------------------------------------ Drop-Down Menus */ | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu { | ||
+ | display: block; | ||
+ | width: 10em; /* Drop-down menu width. | ||
+ | Use MenuTailor.css to customize. */ | ||
+ | height: 1em; | ||
+ | padding: 1px; /* Sets the drop-down menu "effective border" width. */ | ||
+ | position: absolute; | ||
+ | top: 23px; /* Places the drop-down menu under the menu bar. | ||
+ | Keep it sync with the menu bar height. */ | ||
+ | left: 0; /* Aligns the drop-down menu to its top-level item. */ | ||
+ | background-color: black; /* Selected item. */ | ||
+ | color: #FFFFFF; | ||
+ | |||
+ | } | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li a, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a { | ||
+ | width: 10em; /* Keep it sync with the drop-down menu width. | ||
+ | Use MenuTailor.css to customize. */ | ||
+ | height: 1em; | ||
+ | padding-left: 0; | ||
+ | padding-right: 0; | ||
+ | background-color: black; /* Selected item. */ | ||
+ | color: #FFFFFF; | ||
+ | } | ||
+ | ul.DropDownMenu li a span { | ||
+ | display: block; | ||
+ | padding-left: 0.75em; /* Sets the left space of each drop-down menu item. */ | ||
+ | padding-right: 0.25em; /* Sets the right space of each drop-down menu item. */ | ||
+ | text-align: right; /* Aligns the >> symbol to the right. */ | ||
+ | } | ||
+ | ul.DropDownMenu li a span span { | ||
+ | float: left; /* Aligns the text (back) to the left. */ | ||
+ | font: 12px arial, helvetica, sans-serif; /* Required for IE55. */ | ||
+ | height: 20px; | ||
+ | color: #FFFFFF; | ||
+ | } | ||
+ | /*----------------------------------------------------------------------------------- Side Menus */ | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li:hover ul.SideMenu, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu { | ||
+ | display: block; | ||
+ | width: 11em; /* Side menu width. | ||
+ | Use MenuTailor.css to customize. */ | ||
+ | padding: 1px; /* Sets the side menu "effective border" width. */ | ||
+ | position: absolute; | ||
+ | top: -1px; /* Aligns the side menu to its drop-down menu item. | ||
+ | Keep it sync with the side menu "effective border" width. */ | ||
+ | left: 13em; /* Places the side menu to the right of the drop-down menu. | ||
+ | Keep it sync with the drop-down menu width. | ||
+ | Use MenuTailor.css to customize. */ | ||
+ | } | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li:hover ul.SideMenu li a, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu li a { | ||
+ | width: 11em; /* Keep it sync with the side menu width. | ||
+ | Use MenuTailor.css to customize. */ | ||
+ | font: 12px arial, helvetica, sans-serif; /* Required for IE55. */ | ||
+ | left: 13em; /* Places the side menu to the right of the drop-down menu. | ||
+ | Keep it sync with the drop-down menu width. | ||
+ | Use MenuTailor.css to customize. */ | ||
+ | } | ||
+ | div.MenuBar ul li ul.DropDownMenu li ul.SideMenu li a span { | ||
+ | padding-left: 1.5em; /* Sets the left space of each side menu item. */ | ||
+ | padding-right: 0.5em; /* Sets the right space of each side menu item. */ | ||
+ | text-align: left; | ||
+ | font: 12px arial, helvetica, sans-serif; /* Required for IE55. */ | ||
+ | left: 13em; /* Places the side menu to the right of the drop-down menu. | ||
+ | Keep it sync with the drop-down menu width. | ||
+ | Use MenuTailor.css to customize. */ | ||
+ | } | ||
+ | /*----------------------------------------------------------------------------- Browser Specific */ | ||
+ | * html div.MenuBar ul li a { | ||
+ | float: left; /* Required for IE55 and IE6. | ||
+ | Breaks O9. | ||
+ | Hidden (* html) from non-IE browsers. */ | ||
+ | } | ||
+ | * html ul.DropDownMenu li a:hover { | ||
+ | cursor: hand; /* Required for IE55. | ||
+ | Hidden (* html) from non-IE browsers. */ | ||
+ | } | ||
+ | ul.DropDownMenu li a:hover { | ||
+ | cursor: pointer; /* Required for IE6 and IE7. | ||
+ | Hidding it (* html) from non-IE browsers breaks IE7! | ||
+ | } | ||
+ | * html div.MenuBar a:hover { | ||
+ | text-decoration: none; /* Required for IE55 and IE6. | ||
+ | Hidden (* html) from non-IE browsers. */ | ||
+ | } | ||
+ | * html div.MenuBar ul li table, | ||
+ | * html div.MenuBar ul li table td { | ||
+ | border: 0; /* Required for IE55 and IE6. | ||
+ | Hidden (* html) from non-IE browsers. */ | ||
+ | } | ||
+ | /*------------------------------------------------------------------------------- Default Colors */ | ||
+ | div.MenuBar { | ||
+ | background-color: Menu; | ||
+ | border-bottom: 1px solid ButtonShadow; | ||
+ | } | ||
+ | div.MenuBar a { | ||
+ | background-color: Menu; /* Top-level unselected items. */ | ||
+ | color: MenuText; | ||
+ | } | ||
+ | div.MenuBar ul li:hover a, | ||
+ | div.MenuBar ul li a:hover { | ||
+ | color: #ea7f16; | ||
+ | background-color: Highlight; /* Top-level selected item. */ | ||
+ | color: HighlightText; | ||
+ | } | ||
+ | /*...............................................................................................*/ | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu { | ||
+ | background-color: ButtonShadow; /* Sets the drop-down menu "effective border" color. */ | ||
+ | } | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li a, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a { | ||
+ | background-color: Menu; Drop-down menu unselected items. | ||
+ | Sets the drop-down menu "effective background" color. */ | ||
+ | color: MenuText; | ||
+ | } | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li:hover a, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a:hover { | ||
+ | background-color: Highlight; /* Drop-down menu selected item. */ | ||
+ | color: HighlightText; | ||
+ | } | ||
+ | /*...............................................................................................*/ | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li:hover ul.SideMenu, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu { | ||
+ | background-color: ButtonShadow; /* Sets the side menu "effective border" color. */ | ||
+ | } | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li:hover ul.SideMenu li a, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu li a { | ||
+ | background-color: Menu; /* Side menu unselected items. | ||
+ | Sets the side menu "effective background" color. */ | ||
+ | color: MenuText; | ||
+ | } | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li:hover ul.SideMenu li a:hover, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu li a:hover { | ||
+ | background-color: Highlight; /* Side menu selected item. */ | ||
+ | color: HighlightText; | ||
+ | } | ||
+ | /*-----------------------------------------------------------------------------------------------*/ | ||
+ | /*Script-Free 3-Level Menu 1.2 Tailor | ||
+ | www.CesarDaniel.info | ||
+ | /*-------------------------------------------------------------------------------------- General */ | ||
+ | body { | ||
+ | background: white; | ||
+ | color: black; | ||
+ | margin: 0; | ||
+ | border: 0; | ||
+ | padding: 0; | ||
+ | } | ||
+ | |||
+ | |||
+ | div.MenuBar { | ||
+ | font: 13px arial, helvetica, sans-serif; | ||
+ | } | ||
+ | div.MenuBar ul { | ||
+ | font: 13px arial, helvetica, sans-serif; /* Required for IE55. */ | ||
+ | } | ||
+ | /*--------------------------------------------------------------------------------------- Colors */ | ||
+ | div.MenuBar { | ||
+ | background-color: black; /* Selected item. */ | ||
+ | color: #FFFFFF; | ||
+ | border-bottom: 1px solid ButtonShadow; | ||
+ | } | ||
+ | div.MenuBar a, | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li a, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a, | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li:hover ul.SideMenu li a, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu li a { | ||
+ | background-color: black; /* Selected item. */ | ||
+ | color: #FFFFFF; | ||
+ | } | ||
+ | div.MenuBar ul li:hover a, | ||
+ | div.MenuBar ul li a:hover, | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li:hover a, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a:hover, | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li:hover ul.SideMenu li a:hover, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu li a:hover { | ||
+ | background-color: #00b0e6; /* Selected item. */ | ||
+ | color: #FFFFFF; | ||
+ | } | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu, | ||
+ | div.MenuBar ul li:hover ul.DropDownMenu li:hover ul.SideMenu, | ||
+ | div.MenuBar ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu { | ||
+ | background-color: ButtonShadow; /* Sets the drop-down and side menus "effective border" color. */ | ||
+ | } | ||
+ | /*--------------------------------------------------------------------------------------- Widths */ | ||
+ | /* | ||
+ | |||
+ | /* | ||
+ | Menu Bar 1 | ||
+ | Drop-Down Menu #2 | ||
+ | */ | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu#MB1-DDM4, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu#MB1-DDM4, | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu#MB1-DDM4 li a, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu#MB1-DDM4 li a { | ||
+ | width: 11em; /* Drop-down menu width. */ | ||
+ | } | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu#MB1-DDM5, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu#MB1-DDM5, | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu#MB1-DDM5 li a, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu#MB1-DDM5 li a { | ||
+ | width: 12em; /* Drop-down menu width. */ | ||
+ | } | ||
+ | |||
+ | /*...............................................................................................*/ | ||
+ | /* | ||
+ | Menu Bar 1 | ||
+ | Drop-Down Menu #2 | ||
+ | Side Menu #1 | ||
+ | */ | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu li:hover ul.SideMenu#MB1-DDM2-SM1, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu#MB1-DDM2-SM1 { | ||
+ | left: 15.5em !important; /* Places the side menu to the right of the drop-down menu. | ||
+ | Keep it sync with the drop-down menu width. */ | ||
+ | } | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu li:hover ul.SideMenu#MB1-DDM2-SM1, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu#MB1-DDM2-SM1, | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu li:hover ul.SideMenu#MB1-DDM2-SM1 li a, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu#MB1-DDM2-SM1 li a { | ||
+ | width: 10em; /* Side menu width. */ | ||
+ | } | ||
+ | /*...............................................................................................*/ | ||
+ | /* | ||
+ | Menu Bar 1 | ||
+ | Drop-Down Menu #2 | ||
+ | Side Menu #2 | ||
+ | */ | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu li:hover ul.SideMenu#MB1-DDM2-SM2, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu#MB1-DDM2-SM2 { | ||
+ | left: 15.5em !important; /* Places the side menu to the right of the drop-down menu. | ||
+ | Keep it sync with the drop-down menu width. */ | ||
+ | } | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu li:hover ul.SideMenu#MB1-DDM2-SM2, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu#MB1-DDM2-SM2, | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu li:hover ul.SideMenu#MB1-DDM2-SM2 li a, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu#MB1-DDM2-SM2 li a { | ||
+ | width: 10em; /* Side menu width. */ | ||
+ | } | ||
+ | /*...............................................................................................*/ | ||
+ | /* | ||
+ | Menu Bar 1 | ||
+ | Drop-Down Menu #2 | ||
+ | Side Menu #3 | ||
+ | */ | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu li:hover ul.SideMenu#MB1-DDM2-SM3, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu#MB1-DDM2-SM3 { | ||
+ | left: 15.5em !important; /* Places the side menu to the right of the drop-down menu. | ||
+ | Keep it sync with the drop-down menu width. */ | ||
+ | } | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu li:hover ul.SideMenu#MB1-DDM2-SM3, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu#MB1-DDM2-SM3, | ||
+ | div.MenuBar#navi ul li:hover ul.DropDownMenu li:hover ul.SideMenu#MB1-DDM2-SM3 li a, | ||
+ | div.MenuBar#navi ul li a:hover ul.DropDownMenu li a:hover ul.SideMenu#MB1-DDM2-SM3 li a { | ||
+ | width: 10em; /* Side menu width. */ | ||
+ | } | ||
+ | /*...............................................................................................*/ | ||
+ | |||
+ | </style> | ||
+ | |||
<body> | <body> | ||
Line 90: | Line 431: | ||
<!--[if lte IE 6]></td></tr></table></a><![endif]--> | <!--[if lte IE 6]></td></tr></table></a><![endif]--> | ||
</li> | </li> | ||
- | <li><a href="https://2008.igem.org/Team:Heidelberg/Notebook/ | + | <li><a href="https://2008.igem.org/Team:Heidelberg/Notebook/visualization"><span><span>Visualization</span></span></a> |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + | ||
<li><a href="https://2008.igem.org/Team:Heidelberg/Notebook/material"><span><span>Material & Methods</span></span></a> | <li><a href="https://2008.igem.org/Team:Heidelberg/Notebook/material"><span><span>Material & Methods</span></span></a> | ||
<li><a href="https://2008.igem.org/Team:Heidelberg/Notebook/team_meetings"><span><span>Team Meetings</span></span></a> | <li><a href="https://2008.igem.org/Team:Heidelberg/Notebook/team_meetings"><span><span>Team Meetings</span></span></a> |
Revision as of 15:54, 27 October 2008
Contents |
First week
Monday 01/09/2008
- Preparation of TB media with an Agar concentration of 0.4 %, 0.2 % and 0.1 %.
First microscope test using MG1655 in 6 small chambers from Labtek:
3 types each type twice:
I - 0.1% agar in LB
II - 0.25% agar in LB
III - 0.5% agar in LB
View:
I II III
I II III
- In I and II each chamber was filled with just 100 µl LB agar to cover the whole ground.
- Because the III. solution was more viscous 150 µl were necessary to cover the ground.
- The bacteria were put into one corner of a chamber. (2 µl of a MG1655 overnight culture) They have been set under the media or in between.
- About that another 100 µl of a LB solution with 2 % agar were poured. After the second layer has solidified further 250 µl LB-media were added.
- The chambers were incubated overnight at 37 °C. For microscope on the next day.
Notes: Because of surface tensions the solutions tend to be thicker at the borders of the chamber than in the center.
-> In the further future 150 - 200 µl will be used.