Team:Freiburg/Parts
From 2008.igem.org
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[2] Robert M Stroud, Peter Walter: “Signal sequence recognition and protein targeting”, Current Opinion in Structural Biology 1999, 9:754–759<br> | [2] Robert M Stroud, Peter Walter: “Signal sequence recognition and protein targeting”, Current Opinion in Structural Biology 1999, 9:754–759<br> | ||
'''AA sequence:'''<br> | '''AA sequence:'''<br> | ||
- | + | <span style="font-family: monospace; font-weight: ">MRPSGTAGAA LLALLAALCP ASRA</span><br | |
- | <br><br> | + | style="font-family: monospace;"> |
+ | '''gene sequence:'''<br> | ||
+ | <span style="font-family: monospace;">ATGAGACCAT CTGGTACTGC TGGAGCCGCA TTGCTGGCAC TTTTGGCTGC GCTGTGCCCT GCAAGCAGAG CA</span><br> | ||
+ | <br> | ||
*'''Erbb1-transmembrane region'''<br> | *'''Erbb1-transmembrane region'''<br> | ||
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Gene synthesis by ATG:biosynthetics, optimized for expression in homo sapiens by iGEM-Team Freiburg 2008.<br> | Gene synthesis by ATG:biosynthetics, optimized for expression in homo sapiens by iGEM-Team Freiburg 2008.<br> | ||
'''AA sequence:'''<br> | '''AA sequence:'''<br> | ||
- | + | <span style="font-family: monospace; font-weight: ;">ATGMVGALLL LLVVALGIGL FM</span><br | |
- | <br><br> | + | style="font-family: monospace;"> |
+ | '''gene sequence:'''<br> | ||
+ | <span style="font-family: monospace;">ATAGCTACCG GAATGGTGGG TGCACTTTTG CTCCTTTTGG TCGTTGCCCT GGGGATAGGA CTCTTTATG</span><br> | ||
+ | <br> | ||
*'''Sc-Fv anti NIP'''<br> | *'''Sc-Fv anti NIP'''<br> | ||
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Gene synthesis by ATG:biosynthetics, optimized for expression in homo sapiens by iGEM-Team Freiburg 2008.<br> | Gene synthesis by ATG:biosynthetics, optimized for expression in homo sapiens by iGEM-Team Freiburg 2008.<br> | ||
'''AA Sequence:''' <br> | '''AA Sequence:''' <br> | ||
- | + | <span style="font-family: monospace; font-weight: ;">RPACKIPNDL KQKVMNH</span><br | |
+ | style="font-family: monospace;"> | ||
+ | '''gene sequence:'''<br> | ||
+ | <span style="font-family: monospace;">CGACCAGCCT GTAAGATTCC AAATGACCTG AAGCAGAAAG TTATGAATCA C</span><br> | ||
+ | <br> | ||
*'''GGGGS-LINKER_BCR-Transmem.'''<br> | *'''GGGGS-LINKER_BCR-Transmem.'''<br> | ||
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Gene synthesis by ATG:biosynthetics, optimized for expression in homo sapiens by iGEM-Team Freiburg 2008.<br> | Gene synthesis by ATG:biosynthetics, optimized for expression in homo sapiens by iGEM-Team Freiburg 2008.<br> | ||
'''AA sequence:'''<br> | '''AA sequence:'''<br> | ||
- | + | <span style="font-family: monospace; font-weight: bold;">GGGSGGGSGG GSGGG</span><br | |
+ | style="font-family: monospace;"> | ||
+ | '''gene sequence:'''<br> | ||
+ | <span style="font-family: monospace;">GGTGGAGGAG GTTCTGGAGG CGGTGGAAGT GGTGGCGGAG GTAGC</span><br> | ||
+ | <br> | ||
+ | |||
+ | |||
+ | |||
+ | Sc-Fv anti NIP [http://partsregistry.org/wiki/index.php?title=Part:BBa_K157003 BBa_K157003]<br> | ||
+ | AA sequence:<br> | ||
+ | <span style="font-family: monospace; font-weight: bold;">QVQLQQPGAE LVKPGASVKL SCKASGYTFT SYWMHWVKQR PGRGLEWIGR IDPNSGGTKY NEKFKSKATL TVDKPSSTAY MQLSSLTSED SAVYYCARYD YYGGSYFDYW GQGTTVTVSS GGGGSGGGGS GGGGSQAVVT QESALTTSPG ETVTLTCRSS TGAVTTSNYA NWVQEKPDHL FTGLIGGTNN RAPGVPARFS GSLIGDKAAL TITGAQTEDE AIYFCALWYS NHWVFGGGTK LTVLG</span><br | ||
+ | style="font-family: monospace;"> | ||
+ | gene sequence:<br> | ||
+ | <span style="font-family: monospace;">CAGGTGCAGC TCCAGCAGCC CGGAGCCGAA CTGGTGAAGC CAGGCGCCAG CGTGAAGCTG TCCTGCAAGG CCAGCGGCTA CACCTTCACC AGCTACTGGA TGCACTGGGT GAAACAGAGG CCCGGCAGAG GCCTGGAATG GATCGGCCGG ATCGACCCCA ACAGCGGCGG CACCAAGTAC AACGAGAAGT TCAAGAGCAA GGCCACCCTG ACCGTGGACA AGCCCAGCAG CACCGCCTAC ATGCAGCTGT CCAGCCTGAC CAGCGAGGAC AGCGCCGTGT ACTACTGCGC CAGATACGAC TACTACGGCG GCAGCTACTT CGACTACTGG GGCCAGGGCA CCACCGTGAC CGTGTCCTCT GGGGGAGGGG GCTCAGGAGG AGGAGGAAGC GGGGGAGGGG GCAGCCAGGC CGTGGTGACC CAGGAAAGCG CCCTGACCAC TCCCCTGGCG GACAGTGACC TGACCTGCCG TCCTCTACAG GCGCCGTGAC CACAAGCAAC TACGCCAACT GGGTGCAGGA AAAGCCCGAC CACCTGTTCA CCGGCCTGAT CGGCGGCACA AACAACAGAG CCCCTGGCGT GCCCGCTAGA TTCAGCGGCA GCCTGATCGG GGACAAGGCC GCCCTGACAA TCACAGGCGC CCAGACCGAG GACGAGGCCA TCTACTTTTG CGCCCTGTGG TACAGCAACC ACTGGGTGTT CGGCGGAGGG ACCAAGCTGA CCGTGCTGGG C</span><br> | ||
+ | <br> | ||
+ | Split-Venus-N-YFP [http://partsregistry.org/wiki/index.php?title=Part:BBa_K157008 BBa_K157008]<br> | ||
+ | AA sequence:<br> | ||
+ | <span style="font-family: monospace; font-weight: bold;">MVSKGEELFT GVVPILVELD GDVNGHKFSV SGEGEGDATY GKLTLKLICT TGKLPVPWPT LVTTLYLQCF ARYPDHMKQH DFFKSAMPEG YVQERTIFFK DDGNYKTRAE VKFEGDTLVN RIELKGIDFK EDGNILGHKL EYNYNSHNVY ITADKQ</span><br | ||
+ | style="font-family: monospace;"> | ||
+ | gene sequence:<br> | ||
+ | <span style="font-family: monospace;">ATGGTGTCCA AGGGCGAGGA ACTGTTCACC GGCGTGGTGC CCATCCTGGT GGAGCTGGAC GGCGACGTGA ACGGCCACAA GTTCAGCGTG TCCGGCGAGG GCGAAGGCGA CGCCACCTAC GGCAAGCTGA CCCTGAAGCT GATCTGCACC ACCGGCAAGC TGCCCGTGCC CTGGCCCACC CTGGTGACCA CCCTGTACCT CCAGTGCTTC GCCAGATACC CCGACCACAT GAAGCAGCAC GATTTCTTCA AGAGCGCCAT GCCCGAGGGC TACGTGCAGG AACGGACCAT CTTCTTCAAG GACGACGGCA ACTACAAGAC CAGAGCCGAA GTGAAGTTCG AGGGCGACAC ACTGGTGAAC CGGATCGAGC TGAAGGGCAT CGACTTCAAA GAGGACGGCA ATATCCTGGG CCACAAGCTG GAATACAACT ACAACAGCCA CAACGTGTAC ATCACCGCCG ACAAGCAG</span><br | ||
+ | style="font-family: monospace;"> | ||
+ | <br> | ||
+ | Split-Venus-C-YFP [http://partsregistry.org/wiki/index.php?title=Part:BBa_K157007 BBa_K157007]<br> | ||
+ | AA sequence:<br> | ||
+ | <span style="font-family: monospace; font-weight: bold;">KNGIKANFKI RHNIEDGGVQ LADHYQQNTP IGDGPVLLPD NHYLSYQSKL SKDPNEKRDH MVLLEFVTAA GITHGMDELY K</span><br | ||
+ | style="font-family: monospace;"> | ||
+ | gene sequence:<br> | ||
+ | <span style="font-family: monospace;">AAGAACGGCA TCAAGGCCAA CTTCAAGATC CGGCACAACA TCGAGGACGG CGGCGTGCAG CTGGCCGACC ACTACCAGCA GAACACCCCC ATCGGCGACG GCCCCGTGCT GCTGCCCGAC AACCACTACC TGAGCTACCA GAGCAAGCTG TCCAAGGACC CCAACGAGAA GCGGGACCAC ATGGTGCTGC TGGAATTTGT GACAGCCGCC GGAATCACCC ACGGCATGGA CGAGCTGTAC AAG</span><br> | ||
+ | <br> | ||
+ | Cerulean-N-CFP [http://partsregistry.org/wiki/index.php?title=Part:BBa_K157006 BBa_K157006]<br> | ||
+ | AA sequence:<br> | ||
+ | <span style="font-family: monospace; font-weight: bold;">MSKGEELFTG VVPILVELDG DVNGHKFSVS GEGEGDATYG KLTLKFICTT GKLPVPWPTL VTTLGVQCFA RYPDHMKRHD FFKSAMPEGY VQERTIFFKD DGNYKTRAEV KFEGDTLVNR IELKGIDFKE DGNILGHKLE YNAISDNVYI TADKQ</span><br | ||
+ | style="font-family: monospace;"> | ||
+ | gene sequence:<br> | ||
+ | <span style="font-family: monospace;">ATGAGCAAGG GCGAGGAACT GTTCACCGGC GTGGTGCCCA TCCTGGTGGA GCTGGACGGC GACGTGAACG GCCACAAGTT CAGCGTGTCC GGCGAGGGCG AAGGCGACGC CACCTACGGC AAGCTGACCC TGAAGTTCAT CTGCACCACC GGCAAGCTGC CCGTGCCCTG GCCCACCCTG GTGACCACCC TGGGCGTGCA GTGCTTCGCC AGATACCCCG ACCACATGAA GCGGCACGAT TTCTTCAAGA GCGCCATGCC CGAGGGCTAC GTGCAGGAAC GGACCATCTT CTTCAAGGAC GACGGCAACT ACAAGACCAG AGCCGAAGTG AAGTTCGAGG GCGACACACT GGTGAACCGG ATCGAGCTGA AGGGCATCGA CTTCAAAGAG GACGGCAATA TCCTGGGCCA CAAGCTGGAA TACAACGCCA TCAGCGACAA CGTGTACATC ACCGCCGACA GCAG</span><br> | ||
+ | <br> | ||
+ | Cerulean-C-CFP [http://partsregistry.org/wiki/index.php?title=Part:BBa_K157005 BBa_K157005]<br> | ||
+ | AA sequence:<br> | ||
+ | <span style="font-family: monospace; font-weight: bold;">KNGIKANFKI RHNIEDGSVQ LADHYQQNTP IGDGPVLLPD NHYLSTQSKL SKDPNEKRDH</span><br | ||
+ | style="font-family: monospace;"> | ||
+ | gene sequence:<br> | ||
+ | <span style="font-family: monospace;">MVLLEFVTAA GITLGMDELY KAAGAACGGC ATCAAGGCCA ACTTCAAGAT CCGGCACAAC ATCGAGGATG GCAGCGTGCA GCTGGCCGAT CACTACCAGC AGAACACCCC CATCGGCGAC GGCCCCGTGC TGCTGCCCGA CAACCACTAC CTGAGCACCC AGAGCAAGCT GTCCAAGGAC CCCAACGAGA AGCGGGACCA CATGGTGCTG CTGGAATTTG TGACAGCCGC CGGAATCACC CTGGGCATGG ACGAGCTGTA CAAG</span><br> | ||
+ | <br> | ||
+ | Split beta-Lactamase 1/2 [http://partsregistry.org/wiki/index.php?title=Part:BBa_K157018 BBa_K157018]<br> | ||
+ | AA sequence:<br> | ||
+ | <span style="font-family: monospace; font-weight: bold;">MAGIATGMVG ALLLLLVVAL GIGLFMTGHP ETLAKVKDAE DQLGARVGYI ELDLNSGKIL ESFRPEERFP MMSTFKVLLC GAVLSRIDAGQ EQLGRRIHYS QNDLVEYSPV TEKHLTDGM TVGELCSAAI TMSDNTAANL LLTTIGGPKE LTAFLRNMGDH VTRLDRWEPE LNEAIPNDE RDTTTPVAMAT TLRKLLTGEL LGTG*</span><br | ||
+ | style="font-family: monospace;"> | ||
+ | gene sequence:<br> | ||
+ | <span style="font-family: monospace;">ATGGCCGGCA TAGCTACCGG AATGGTGGGT GCACTTTTGC TCCTTTTGGT CGTTGCCCTG | ||
+ | GGGATAGGAC TCTTTATGAC CGGCCACCCG GAAACCCTGG CCAAAGTGAA AGATGCGGAA GATCAGCTGG GTGCGCGTGT GGGCTATATT GAACTGGATC TGAACAGCGG CAAAATTCTG GAATCTTTTC GTCCGGAAGA ACGTTTTCCG ATGATGAGCA CCTTTAAAGT GCTGCTGTGC | ||
+ | GGTGCGGTTC TGAGCCGTAT TGATGCGGGC CAGGAACAGC TGGGCCGTCG TATTCATTAT AGCCAGAACG ATCTGGTGGA ATATAGCCCG GTGACCGAAA AACATCTGAC CGATGGCATG ACCGTGGGCG AACTGTGCAG CGCGGCGATT ACCATGAGCG ATAACACCGC GGCGAACCTG CTGCTGACCA CCATTGGCGG TCCGAAAGAA CTGACCGCGT TTCTGCGTAA CATGGGCGAT CATGTGACCC GTCTGGATCG TTGGGAACCG GAACTGAACG AAGCGATTCC GAACGATGAA | ||
+ | CGTGATACCA CCACCCCGGT GGCCATGGCG ACCACCCTGC GTAAACTGCT GACCGGCGAA CTGCTGGGCA CCGGTTAA</span><br> | ||
+ | <br> | ||
+ | Split beta-Lactamase 2/2 [http://partsregistry.org/wiki/index.php?title=Part:BBa_K157019 BBa_K157019]<br> | ||
+ | AA sequence:<br> | ||
+ | <span style="font-family: monospace; font-weight: bold;">MAGIATGMVG ALLLLLVVAL GIGLFMTGGT PASRQQLMDW MKADKVAGPL LRSVLPAGWF IADKSGAGER GSRGIIAALG PDGKPSRIVV IYTTGSQATM DELNRQIAEI GASLIKHWTG * | ||
+ | </span><br | ||
+ | style="font-family: monospace;"> | ||
+ | gene sequence:<br> | ||
+ | <span style="font-family: monospace;">ATGGCCGGCA TAGCTACCGG AATGGTGGGT GCACTTTTGC TCCTTTTGGT CGTTGCCCTG GGGATAGGAC TCTTTATGAC CGGCGGTACT CCGGCTTCCC GGCAACAATT AATGGACTGG ATGAAAGCGG ATAAAGTTGC AGGACCACTT CTGCGCTCGG TGCTTCCGGC TGGCTGGTTT ATTGCTGATA AATCTGGAGC CGGTGAGCGT GGGTCTCGCG GTATCATTGC AGCACTGGGG CCAGATGGTA AGCCCTCCCG TATCGTAGTT ATCTACACGA CGGGGAGTCA GGCAACTATG GATGAACTGA ATCGTCAGAT CGCTGAGATA GGTGCCTCAC TGATTAAGCA TTGGACCGGT | ||
+ | TAA</span><br> | ||
+ | <br> | ||
+ | Split Luciferase 58 [http://partsregistry.org/wiki/index.php?title=Part:BBa_K157020 BBa_K157020]<br> | ||
+ | AA sequence:<br> | ||
+ | <span style="font-family: monospace; font-weight: bold;">EAIVDIPEIP GFKDLEPMEQ FIAQVDLCVD CTTGCLKGLA NVQCSDLLKK WLPQRCATFA SKIQGQVDKI KGAGGD</span><br | ||
+ | style="font-family: monospace;"> | ||
+ | gene sequence:<br> | ||
+ | <span style="font-family: monospace;">GAAGCGATTG TGGATATTCC GGAAATTCCG GGCTTTAAAG ATCTGGAACC GATGGAACAG TTTATTGCGC AGGTGGATCT GTGCGTGGAT TGCACCACCG GCTGCCTGAA AGGCCTGGCC AACGTGCAGT GCAGCGATCT GCTGAAAAAA TGGCTGCCGC AGCGTTGCGC GACCTTTGCG AGCAAAATTC AGGGCCAGGT GGATAAAATT AAAGGCGCGG GTGGCGAT</span><br> | ||
+ | <br> | ||
+ | Split Luciferase 57 [http://partsregistry.org/wiki/index.php?title=Part:BBa_K157021 BBa_K157021]<br> | ||
+ | AA sequence:<br> | ||
+ | <span style="font-family: monospace; font-weight: bold;">KPTENNEDFN IVAVASNFAT TDLDADRGKL PGKKLPLEVL KEMEANARKA GCTRGCLICL SHIKCTPKMK KFIPGRCHTY EGDKESAQGG IG</span><br | ||
+ | style="font-family: monospace;"> | ||
+ | gene sequence:<br> | ||
+ | <span style="font-family: monospace;">AAACCGACCG AAAACAACGA AGATTTTAAC ATTGTGGCGG TGGCGAGCAA CTTTGCGACC ACCGATCTGG ATGCGGATCG TGGCAAACTG CCGGGCAAAA AACTGCCGCT GGAAGTGCTG AAAGAAATGG AAGCGAACGC GCGTAAAGCC GGTTGCACCC GTGGCTGCCT GATTTGCCTG AGCCATATTA AATGCACCCC GAAAATGAAA AAATTTATCC CGGGTCGTTG CCATACCTAT GAAGGCGATA AAGAAAGCGC GCAGGGCGGC ATTGGC</span><br> | ||
+ | |||
+ | |||
+ | |||
+ | |||
+ | |||
+ | |||
+ | |||
Revision as of 18:20, 28 October 2008
Parts |
_parts
basic parts
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Part Name: Source (all split-fluorophores):
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Sc-Fv anti NIP [http://partsregistry.org/wiki/index.php?title=Part:BBa_K157003 BBa_K157003]
composite partsPart BBa_K157014 - BBa_K157039, Part BBa_K157040 (modified expression plasmid with CMV-promoter(for expression in human cells) and BBa_K157041 (BBa_K157040 + CFP) |