EPF-Lausanne/14 August 2008

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Molecular biology

We do a mini-prep of E1010, "F1610" and P0140

E1010/F1610

Yesterday we found out that F1610 has a size of 300bp, instead of 800bp. So there are two hypotheses: 1) The mini-prep is bad or 2) the biobrick from IGEM is bad.

So we do another digestion serie with EcoRI and SpeI. We do with different mini-prep of F1610 and the last mini-prep of E1010 that work(for positiv control).

Some mini-prep from F1610 are too small, there isn't enough liquid so we do PCR with these (we use E1010 from last mini-prep as a positiv control).

We do in same time PCR of all fragments that ligated E1010/F1610 to see if there is a fragment of 1500 bp.

Resultat of Gel

All mini-preps of F1610 have a fragment of 300 bp. So the biobrick from IGEM doesn't work. All ligated fragments E1010/F1610 aren't ligate.

(see Gel picture on page 75 in notebook of lab)

Test of specific primer of BBs

We do a PCR to see if specific primers that Alexandre commanded work with biobrick. We do gel tomorrow.