Michał K.:

1.Setup of 9 separate cultures from 9 colonies of transformants pMPMT5+AID (liquid LB+tetracycline).
2. Optimization of conditions for PCR to obtain AID DNA fragment - annealing temperature gradient (from 62°C to 82°C).
Primers: AIDlNrH AIDpLinB
Template DNA: pTrc99A-AID

Elongation time: 60 sec

20 cycles

3. Optimization of conditions for PCR - T7 RNA polymerase for translation fusion; annealing temperature gradient (from 62°C to 82°C).
Primers: T7lLinkB T7pXbSal

Template DNA: E. coli <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#rosetta">Rosetta</a> genomic DNA

Elongation time: 4 minutes

20 cycles

4. Optimization of conditions for PCR - T7 RNA polymerase for transcription fusion; annealing temperature gradient (from 62°C to 82°C).
Primers: T7lRBSHi T7pXbSal

Template DNA: E. coli <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#rosetta">Rosetta</a> and <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top">TOP10</a> (negative control) genomic DNA

Elongation time: 4 minutes

20 cycles

5. Gel electrophoresis of PCR products.

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