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Team:ETH Zurich/Modeling/Switch Circuit
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Revision as of 15:54, 26 October 2008 by
Nico
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Contents
1
Switch Circuit
1.1
Detailed Model
1.1.1
Diffusion of IPTG
1.1.2
Diffusion of tet
1.1.3
Binding of tetR to LacI-promotor and LacIIs-promotor
1.1.4
Binding of LacI and LacIIs to GFP-promotor
1.1.5
binding of tet to tetR
1.1.6
binding of IPTG to LacI
1.1.7
transcription and translation of LacI
1.1.8
transcription and translation of LacIIs
1.1.9
transcription and translation of tetR
1.1.10
transcription and translation of GFP
1.1.11
dimerization of tetR
1.1.12
dimerization and tetramerization of LacI and LacIIs
1.2
Implementation
1.3
Simulation
1.4
Results and Discussion
1.5
Parameters
1.6
References
Switch Circuit
Detailed Model
Diffusion of IPTG
Diffusion of tet
Binding of tetR to LacI-promotor and LacIIs-promotor
Binding of LacI and LacIIs to GFP-promotor
binding of tet to tetR
binding of IPTG to LacI
transcription and translation of LacI
transcription and translation of LacIIs
transcription and translation of tetR
transcription and translation of GFP
dimerization of tetR
dimerization and tetramerization of LacI and LacIIs
Implementation
Simulation
Results and Discussion
Parameters
References
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