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_3D-modeling
DNA-Origami
Planning the input pattern on the DNA-Origami surface, we generated various 3D-models of the huge molecule using "Nano-Engineer", Pymol and SwissPdbViewer (both freeware). Some of those models are shown here to give you an impression of the molecules we have engineered this year.
 Fig.1:Some of the oligo nucleotides that shape the single-strand template fused to NIP-molecules and an anti-NIP-Fab-Fragment
 Fig.2:DNA-Origami with NIP-molecules and anti-NIP-fragment |
 Fig.3:Oligo-pattern with scale and two fragments (dimerization model) |
 Fig.4:Oligo-pattern with scale and two T-Cell-receptors (dimerization model) |
 Fig.5:Oligo-pattern with NIP-molecules and Fab-fragment, binding accessibility estimation model
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Fusion Proteins
The pictures below show models of the fusion proteins our composite parts Bba_K157032 and Bba_K157033 code for (generated with "SwissPdbViewer"):
 
Fig.5: Red: LipocalinFluA, Grey: "Transmembrane region (BCR, no structural data; symbolized by helix), Blue: left: Split-Cerulean (CFP), N-terminal fragment; right: Split-Cerulean (CFP), C-terminal fragment
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