Team:Paris/Modeling/f7
From 2008.igem.org
At the steady-state, we haveand
so the expression
gives
and
and for calculated values of the TF,
and
param | signification | unit | value |
[expr(pFlgA)] | expression rate of pFlgA with RBS E0032 | nM.s-1 | see "findparam" need for 20 + 20 measures and 5x5 measures for the SUM? |
γGFP | dilution-degradation rate of GFP(mut3b) | s-1 | ln(2)/3600 |
[GFP] | GFP concentration at steady-state | nM | need for 20 + 20 measures and 5x5 measures for the SUM? |
(fluorescence) | value of the observed fluorescence | au | need for 20 + 20 measures and 5x5 measures for the SUM? |
conversion | conversion ration between fluorescence and concentration | nM.au-1 | (1/79.429) |
param | signification corresponding parameters in the equations | unit | value |
β55 | production rate of FlhDC-pFlgA with RBS E0032 β55 | nM.s-1 | |
(K49/{coefflhDC}n49) | activation constant of FlhDC-pFlgA K49 | nMn49 | |
n49 | complexation order of FliA-pFlgA n49 | no dimension | |
β56 | production rate of FliA-pFlgA with RBS E0032 β56 | nM.s-1 | |
(K50/{coeffliA}n50) | activation constant of FliA-pFlgA K50 | nMn50 | |
n50 | complexation order of FliA-pFlgA n50 | no dimension |
Then, if we have time, we want to verify the expected relation