Setup of 9 separate cultures from 9 colonies of transformants pMPMT5+AID (liquid LB+tetracycline).
Optimization of conditions for PCR to obtain AID DNA fragment - annealing temperature gradient (from 62°C to 82°C).
Primers:
AIDlNrHAIDpLinB
Template DNA: pTrc99A-AID
Elongation time: 60 sec
20 cycles
Optimization of conditions for PCR - T7 RNA polymerase for translation fusion; annealing temperature gradient (from 62°C to 82°C).
Primers:
T7lLinkBT7pXbSal
Template DNA: E. coliRosetta genomic DNA
Elongation time: 4 minutes
20 cycles
Optimization of conditions for PCR - T7 RNA polymerase for transcription fusion; annealing temperature gradient (from 62°C to 82°C).
Primers:
T7lRBSHiT7pXbSal
Template DNA: E. coliRosetta and TOP10 (negative control) genomic DNA
Elongation time: 4 minutes
20 cycles
Gel electrophoresis of PCR products(there wasn't any products for T7 RNA polymerase for translation fusion).