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Revision as of 22:57, 28 October 2008

Let us consider the probability of CAI-1 interacting with our fusion kinase with a reaction rate k, diffusion rates D1 and D2 and they start at a distance d apart at the beginning of the time interval

The reaction between two diffusing particles can be considered to take place in two steps. First the encounter of CAI-1 with Fusion kinase and second the actual reaction of passing protein to response regulatory receptor. If we let CAI-1 as entity A and fusion kinase as entity B then the rate of reaction can given as:

Where

is the probability of interaction between CAI-1 and Fusion Kinase.

is the reaction once CAI-1 has interacted with Fusion Kinase.
This interaction will follow the law of diffuion and if we let the process under consideration as Poisson process, the probability can be given as:

To find the probability of rest of reaction i.e. from activation of UvrY till the shining of our protein we can use the Gaussian Distribution, which can be given as:

.

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-Let us consider the probability of CAI-1 interacting with our fusion kinase with a reaction rate k, diffusion rates D1 and D2 and they start at a distance d apart at the beginning of the time interval<img src="http://lh4.ggpht.com/coa07mhk/SQZQsubfzCI/AAAAAAAAANw/92s3DnMCXMo/s144/delta_t.PNG" />The reaction between two diffusing particles can be considered to take place in two steps. First the encounter of CAI-1 with Fusion kinase and second the actual reaction of passing protein to response regulatory receptor.  If we let CAI-1 as entity A and fusion kinase as entity B then the rate of reaction can given as:
+Let us consider the probability of CAI-1 interacting with our <a href="https://2008.igem.org/Team:University_of_Sheffield_/Project#Downstream_the_Fusion_Kinase">fusion kinase</a> with a reaction rate k, diffusion rates D1 and D2 and they start at a distance d apart at the beginning of the time interval<img src="http://lh4.ggpht.com/coa07mhk/SQZQsubfzCI/AAAAAAAAANw/92s3DnMCXMo/s144/delta_t.PNG" />The reaction between two diffusing particles can be considered to take place in two steps. First the encounter of CAI-1 with Fusion kinase and second the actual reaction of passing protein to response regulatory receptor.  If we let CAI-1 as entity A and fusion kinase as entity B then the rate of reaction can given as:
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