http://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&feed=atom&action=historyTeam:KULeuven/Software/Simbiology2LaTeX - Revision history2024-03-29T13:00:04ZRevision history for this page on the wikiMediaWiki 1.16.5http://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&diff=51177&oldid=prevAvdmeers at 15:03, 3 October 20082008-10-03T15:03:39Z<p></p>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Introduction ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Introduction ==</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>We've written a small toolbox to convert the information in the Matlab Simbiology models to LaTeX-code. This code can be easily converted to a pdf-file with various open source programs (e.g. [http://www.texniccenter.org/index.php?id=20 TeXnicCenter for Windows]). The idea for this toolbox is based on the plugin [http://systems-biology.org/cd/plugins.html Squeezer] for CellDesigner.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>We've written a small toolbox to convert the information in the Matlab Simbiology models to LaTeX-code. This code can be easily converted to a pdf-file with various open source programs (e.g. [http://www.texniccenter.org/index.php?id=20 TeXnicCenter for Windows]). The idea for this toolbox is based on the plugin [http://systems-biology.org/cd/plugins.html Squeezer] for CellDesigner.</div></td></tr>
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</table>Avdmeershttp://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&diff=51074&oldid=prevAvdmeers at 12:20, 3 October 20082008-10-03T12:20:05Z<p></p>
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</table>Avdmeershttp://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&diff=43782&oldid=prevNickvd at 14:54, 9 September 20082008-09-09T14:54:08Z<p></p>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>The Simbiology2LaTeX Toolbox is made available for non commercial research purposes only under the GNU General Public License. However, notwithstanding any provision of the GNU General Public License, Simbiology2LaTeX Toolbox may not be used for commercial purposes without explicit written permission after contacting <a href="mailto:igem@kuleuven.be?SUBJECT=IGEM 2008:License Simbiology2LaTeX">igem@kuleuven.be</a>.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>The Simbiology2LaTeX Toolbox is made available for non commercial research purposes only under the GNU General Public License. However, notwithstanding any provision of the <ins class="diffchange diffchange-inline"><a href="http://www.gnu.org/copyleft/gpl.html"></ins>GNU General Public License<ins class="diffchange diffchange-inline"></a></ins>, Simbiology2LaTeX Toolbox may not be used for commercial purposes without explicit written permission after contacting <a href="mailto:igem@kuleuven.be?SUBJECT=IGEM 2008:License Simbiology2LaTeX">igem@kuleuven.be</a>.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div></p></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div></p></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><p> When reporting results obtained by Simbiology2LaTeX Toolbox, one should refer to </p></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div><p> When reporting results obtained by Simbiology2LaTeX Toolbox, one should refer to </p></div></td></tr>
</table>Nickvdhttp://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&diff=43775&oldid=prevNickvd at 14:50, 9 September 20082008-09-09T14:50:07Z<p></p>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>*The formatted equations are sometimes too long.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>*The formatted equations are sometimes too long.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>*There can only be one model in the project file. The first model will always the chosen one.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>*There can only be one model in the project file. The first model will always the chosen one.</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">== Remarks ==</ins></div></td></tr>
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<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><html><center><div style="float:center;background:#5cc7dd;width:600px;height:170px" ></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><p></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">The Simbiology2LaTeX Toolbox is made available for non commercial research purposes only under the GNU General Public License. However, notwithstanding any provision of the GNU General Public License, Simbiology2LaTeX Toolbox may not be used for commercial purposes without explicit written permission after contacting <a href="mailto:igem@kuleuven.be?SUBJECT=IGEM 2008:License Simbiology2LaTeX">igem@kuleuven.be</a>.</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></p></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><p> When reporting results obtained by Simbiology2LaTeX Toolbox, one should refer to </p></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"><p> <center>iGEM2008/Team:KULeuven, Maarten Breckpot <br></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">Simbiology2LaTeX Toolbox</center></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></p></ins></div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== File ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== File ==</div></td></tr>
</table>Nickvdhttp://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&diff=42705&oldid=prevNickvd: /* Problems */2008-09-05T15:30:24Z<p><span class="autocomment">Problems</span></p>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Problems ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Problems ==</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>The formatted equations are sometimes too long.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">*</ins>The formatted equations are sometimes too long.</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>There can only be one model in the project file. The first model will always the chosen one.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">*</ins>There can only be one model in the project file. The first model will always the chosen one.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== File ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== File ==</div></td></tr>
</table>Nickvdhttp://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&diff=42688&oldid=prevZeunas at 14:21, 5 September 20082008-09-05T14:21:44Z<p></p>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>= Introduction =</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>= Introduction <ins class="diffchange diffchange-inline">=</ins>=</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>We've written a small toolbox to convert the information in the Matlab Simbiology models to LaTeX-code. This code can be easily converted to a pdf-file with various open source programs (e.g. [http://www.texniccenter.org/index.php?id=20 TeXnicCenter for Windows]). The idea for this toolbox is based on the plugin [http://systems-biology.org/cd/plugins.html Squeezer] for CellDesigner.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>We've written a small toolbox to convert the information in the Matlab Simbiology models to LaTeX-code. This code can be easily converted to a pdf-file with various open source programs (e.g. [http://www.texniccenter.org/index.php?id=20 TeXnicCenter for Windows]). The idea for this toolbox is based on the plugin [http://systems-biology.org/cd/plugins.html Squeezer] for CellDesigner.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>= The Program =</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>= The Program <ins class="diffchange diffchange-inline">=</ins>=</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>== GUI ==</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>== GUI <ins class="diffchange diffchange-inline">=</ins>==</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The program consists of GUI as interface between the user and the converting code. You can start the program by typing "Simbiology2Latex" in the Matlab console. The GUI looks like this:</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The program consists of GUI as interface between the user and the converting code. You can start the program by typing "Simbiology2Latex" in the Matlab console. The GUI looks like this:</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Image:Simbiology2Latex.png|center|GUI Preview]]</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Image:Simbiology2Latex.png|center|GUI Preview]]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>== Use ==</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>== Use <ins class="diffchange diffchange-inline">=</ins>==</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>=== Step 1 ===</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>=== Step 1 <ins class="diffchange diffchange-inline">=</ins>===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The first thing you have to do is import the model. You can do this by clicking on the "Load Project File" button or by File > Load in the menu bar. After you imported the right model, you'll see some information about your project, like the project name, the number of compartments, reactions, ...</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The first thing you have to do is import the model. You can do this by clicking on the "Load Project File" button or by File > Load in the menu bar. After you imported the right model, you'll see some information about your project, like the project name, the number of compartments, reactions, ...</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>=== Step 2 ===</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>=== Step 2 <ins class="diffchange diffchange-inline">=</ins>===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The second step is optional and consists of different substeps. With the button "Load Logo" you can import a logo (e.g. the team logo) that will be on the front page of your pdf-file. You can also give the name of the author, title and subtitle of the project.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The second step is optional and consists of different substeps. With the button "Load Logo" you can import a logo (e.g. the team logo) that will be on the front page of your pdf-file. You can also give the name of the author, title and subtitle of the project.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Image:Simbiology2Latex_2.png|center|GUI Result]]</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[[Image:Simbiology2Latex_2.png|center|GUI Result]]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>=== Step 3 ===</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>=== Step 3 <ins class="diffchange diffchange-inline">=</ins>===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Push "RUN" to generate your TeX-file.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Push "RUN" to generate your TeX-file.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>=== Step 4 ===</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>=== Step 4 <ins class="diffchange diffchange-inline">=</ins>===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Open an Editor to convert the TeX-file into a pdf-file.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Open an Editor to convert the TeX-file into a pdf-file.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>= Problems =</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>= Problems <ins class="diffchange diffchange-inline">=</ins>=</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The formatted equations are sometimes too long.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The formatted equations are sometimes too long.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>There can only be one model in the project file. The first model will always the chosen one.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>There can only be one model in the project file. The first model will always the chosen one.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>= File =</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>= File <ins class="diffchange diffchange-inline">=</ins>=</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[https://static.igem.org/mediawiki/2008/9/9f/Simbiology2Latex.zip ZIP-file]</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[https://static.igem.org/mediawiki/2008/9/9f/Simbiology2Latex.zip ZIP-file]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>= Features =</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">=</ins>= Features <ins class="diffchange diffchange-inline">=</ins>=</div></td></tr>
</table>Zeunashttp://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&diff=42684&oldid=prevMaarten: /* Step 2 */2008-09-05T14:12:22Z<p><span class="autocomment">Step 2</span></p>
<table style="background-color: white; color:black;">
<col class='diff-marker' />
<col class='diff-content' />
<col class='diff-marker' />
<col class='diff-content' />
<tr valign='top'>
<td colspan='2' style="background-color: white; color:black;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 14:12, 5 September 2008</td>
</tr><tr><td colspan="2" class="diff-lineno">Line 18:</td>
<td colspan="2" class="diff-lineno">Line 18:</td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Step 2 ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Step 2 ===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The second step is optional and consists of different substeps. With the button "Load Logo" you can import a logo (e.g. the team logo) that will be on the front page of your pdf-file. You can also give the name of the author, title and subtitle of the project.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The second step is optional and consists of different substeps. With the button "Load Logo" you can import a logo (e.g. the team logo) that will be on the front page of your pdf-file. You can also give the name of the author, title and subtitle of the project.</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">A result after step 1 and 2:</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">[[Image:Simbiology2Latex_2.png|center|GUI Result]]</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Step 3 ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Step 3 ===</div></td></tr>
</table>Maartenhttp://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&diff=42674&oldid=prevMaarten: /* Problems */2008-09-05T13:50:48Z<p><span class="autocomment">Problems</span></p>
<table style="background-color: white; color:black;">
<col class='diff-marker' />
<col class='diff-content' />
<col class='diff-marker' />
<col class='diff-content' />
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<td colspan='2' style="background-color: white; color:black;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 13:50, 5 September 2008</td>
</tr><tr><td colspan="2" class="diff-lineno">Line 28:</td>
<td colspan="2" class="diff-lineno">Line 28:</td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The formatted equations are sometimes too long.</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>The formatted equations are sometimes too long.</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>There can only be one model in the project file. The first model will always <del class="diffchange diffchange-inline">be </del>chosen.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>There can only be one model in the project file. The first model will always <ins class="diffchange diffchange-inline">the </ins>chosen <ins class="diffchange diffchange-inline">one</ins>.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>= File =</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>= File =</div></td></tr>
</table>Maartenhttp://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&diff=42672&oldid=prevMaarten: /* Step 4 */2008-09-05T13:49:37Z<p><span class="autocomment">Step 4</span></p>
<table style="background-color: white; color:black;">
<col class='diff-marker' />
<col class='diff-content' />
<col class='diff-marker' />
<col class='diff-content' />
<tr valign='top'>
<td colspan='2' style="background-color: white; color:black;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 13:49, 5 September 2008</td>
</tr><tr><td colspan="2" class="diff-lineno">Line 23:</td>
<td colspan="2" class="diff-lineno">Line 23:</td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Step 4 ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Step 4 ===</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>Open <del class="diffchange diffchange-inline">a </del>Editor <del class="diffchange diffchange-inline">for converting </del>the TeX-file into a pdf-file.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>Open <ins class="diffchange diffchange-inline">an </ins>Editor <ins class="diffchange diffchange-inline">to convert </ins>the TeX-file into a pdf-file.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>= Problems =</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>= Problems =</div></td></tr>
</table>Maartenhttp://2008.igem.org/wiki/index.php?title=Team:KULeuven/Software/Simbiology2LaTeX&diff=42670&oldid=prevMaarten: /* Step 3 */2008-09-05T13:48:22Z<p><span class="autocomment">Step 3</span></p>
<table style="background-color: white; color:black;">
<col class='diff-marker' />
<col class='diff-content' />
<col class='diff-marker' />
<col class='diff-content' />
<tr valign='top'>
<td colspan='2' style="background-color: white; color:black;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 13:48, 5 September 2008</td>
</tr><tr><td colspan="2" class="diff-lineno">Line 20:</td>
<td colspan="2" class="diff-lineno">Line 20:</td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Step 3 ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Step 3 ===</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>Push <del class="diffchange diffchange-inline">on </del>"RUN" to generate your TeX-file.</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>Push "RUN" to generate your TeX-file.</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Step 4 ===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>=== Step 4 ===</div></td></tr>
</table>Maarten