Team:UC Berkeley Tools/Development

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(Difference between revisions)
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==Clotho Beta: Future Development==
==Clotho Beta: Future Development==
===New Features===
===New Features===
-
* New design views to supplement the Sequence View and allow easier designing of basic and composite BioBrick parts.
+
* New design views to supplement the Sequence View and allow easier designing of basic and composite BioBrick parts
* Ability to interface with devices, including robots that can be used for automated production of parts designed in Clotho.
* Ability to interface with devices, including robots that can be used for automated production of parts designed in Clotho.
[[Image:Biomek3000.jpg|200 px|A Biomek 3000 Pippeting Robot]]
[[Image:Biomek3000.jpg|200 px|A Biomek 3000 Pippeting Robot]]
===Improved Features:===
===Improved Features:===
-
* More Database support (systems like [http://brickit.wiki.sourceforge.net/ BrickIt!])
+
* More database support (systems like [http://brickit.wiki.sourceforge.net/ BrickIt!])
-
*
+
* Improved Plug-in environment that allows users to add even more expanded functionality to Clotho
 +
 
==Helping Out In The Lab: Assembly Algorithms==
==Helping Out In The Lab: Assembly Algorithms==
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PoBoL stands for "Provisional BioBrick Language", and is the name given to a technical standard for BioBrick data in synthetic biology databases.  Put simply, our implementation of PoBoL
PoBoL stands for "Provisional BioBrick Language", and is the name given to a technical standard for BioBrick data in synthetic biology databases.  Put simply, our implementation of PoBoL
-
For more information on the PoBoL standard, check out [http://www.pobol.org/]
+
[[Image:PoBoLDiagram.png]]
 +
 
 +
For more information on the PoBoL standard, check out [http://www.pobol.org/ www.pobol.org]
==Increasing Collaboration Through Better Access To Database==
==Increasing Collaboration Through Better Access To Database==
Through a combination of PoBoL
Through a combination of PoBoL

Revision as of 08:56, 24 October 2008

Clotho Title small.png


Contents

Clotho Beta: Future Development

New Features

  • New design views to supplement the Sequence View and allow easier designing of basic and composite BioBrick parts
  • Ability to interface with devices, including robots that can be used for automated production of parts designed in Clotho.

A Biomek 3000 Pippeting Robot

Improved Features:

  • More database support (systems like BrickIt!)
  • Improved Plug-in environment that allows users to add even more expanded functionality to Clotho


Helping Out In The Lab: Assembly Algorithms

  • Using the assembly algorithms, helped

PoBoL: BioBrick Data Sharing Made Easy

PoBoL stands for "Provisional BioBrick Language", and is the name given to a technical standard for BioBrick data in synthetic biology databases. Put simply, our implementation of PoBoL

PoBoLDiagram.png

For more information on the PoBoL standard, check out www.pobol.org

Increasing Collaboration Through Better Access To Database

Through a combination of PoBoL