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Team:UNIPV-Pavia/Parts
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Assembled Parts Notation
In notebook section we sometimes use abbreviations to name assembled parts. New parts' official name, notebook abbreviations and new parts description are reported in the following table:
| New Part | Notebook Name | Assembled Parts(code) | Assembled Parts(name) | Vector | Description |
|---|---|---|---|---|---|
| - | 01 | J23100-E0240 | Pcon-GFP_protein_generator | J61002 | Test |
| - | 02 | J23100-B0030 | Pcon-RBS | pSB1A2 | Intermediate |
| - | 03 | R0051-B0030 | Plambda-RBS | pSB1A2 | Intermediate |
| - | 04 | B0030-E0040 | RBS-GFP | pSB1A2 | Intermediate |
| - | 05 | B0030-C0051 | RBS-cI | pSB1A2 | Intermediate |
| - | 06 | 23100-E1010 | RBS-RFP | pSB1A2 | Intermediate |
| - | 07 | B0030-C0061 | RBS-luxI | pSB1A2 | Intermediate |
| - | 08 | B0030-C0078 | RBS-lasI | pSB1A2 | Intermediate |
| - | 09 | J23100-B0030-C0012 | Pcon-RBS-lacI | pSB1A2 | Intermediate |
| - | 10 | J23100-B0030-C0040 | Pcon-RBS-tetR | pSB1A2 | Intermediate |
| - | 11 | J23100-B0030-I15010 | Pcon-RBS-cph8 | pSB1A2 | Intermediate |
| - | 12 | R0051-B0030-C0062 | Plambda-RBS-luxR | pSB1A2 | Intermediate |
| - | 13 | B0030-E0040-B1006 | RBS-GFP-T | pSB1AK3 | GFP protein generator with 39bp artificial terminator |
| - | 14 | B0030-C0051-B0030 | RBS-cI-RBS | pSB1A2 | Intermediate |
| - | 15 | B0030-E1010-B1006 | RBS-RFP-T | pSB1AK3 | GFP protein generator with 39bp artificial terminator |
| - | 16 | B0030-C0061-B1006 | RBS-luxI-T | pSB1AK3 | luxI protein generator RCT |
| - | 17 | B0030-C0078-B1006 | RBS-lasI-T | pSB1AK3 | lasI protein generator RCT |
| - | 18 | B0030-I15009 | RBS-pcyA | pSB1A2 | Intermediate |
| - | 19 | J23100-B0030-C0012-B1006 | Pcon-RBS-lacI-T | pSB1AK3 | lacI protein generator PRCT |
| - | 20 | J23100-B0030-C0040-B1006 | Pcon-RBS-tetR-T | pSB1AK3 | tetR protein generator PCRT |
| - | 21 | J23100-B0030-I15010-B0030 | Pcon-RBS-cph8-RBS | ? | Intermediate |
| - | 22 | R0051-B0030-C0062-B1006 | Plambda-RBS-luxR-T | pSB1AK3 | Plambda regulated luxR protein generator PRCT |
| - | 23 | B0030-C0051-B0030-C0079 | RBS-cI-RBS-lasR | pSB1A2 | Intermediate |
| - | 24 | B0030-C0061-B1006-R0062 | RBS-luxI-T-Plux | pSB1A2 | Mux - Channel 0 |
| - | 25 | B0030-C0078-B1006-R0079 | RBS-lasI-T-Plas | pSB1A2 | Mux - Channel 1 |
| - | 26 | B0030-I15009-B1006 | RBS-pcyA-T | pSB1AK3 | pcyA protein generator RCT |
| - | 27 | J23100-B0030-C0012-B1006-R0010 | Pcon-RBS-lacI-T-Plac | pSB1AK3 | lacI composite part: PRCT-Plac |
| - | 28 | J23100-B0030-C0040-B1006-R0040 | Pcon-RBS-tetR-T-Ptet | pSB1A2 | tetR composite part: PRCT-Ptet |
| - | 29 | J23100-B0030-I15010-B0030-I15008 | Pcon-RBS-cph8-RBS-ho1 | ? | Intermediate |
| - | 30 | R0051-B0030-C0062-B1006-R0062 | Plambda-RBS-luxR-T-Plux | pSB1A2 | luxR composite part: Plambda regulated PRCT-Plux |
| - | 31 | B0030-C0051-B0030-C0079-B1006 | RBS-cI-RBS-lasR-T | pSB1AK3 | cI-lasR protein generator RCRCT |
| - | 32 | B0030-I15009-B1006-R0082 | RBS-pcyA-T-Pomp | pSB1A2 | pcyA composite part: RCT-Pomp |
| - | 33 | J23100-B0030-I15010-B0030-I15008-B0030-I15009-B1006-R0082 | Pcon-RBS-cph8-RBS-ho1-RBS-pcyA-T-Pomp | ? | Light responsive system under constitutive promoter: PRCRCRCT-Pomp |
| - | 34 | B0030-C0051-B0030-C0079-B1006-R0051-B0030-C0062-B1006-R0062 | RBS-cI-RBS-lasR-T-Plambda-RBS-luxR-T-Plux | pSB1AK3 | Demux - Selector |
| - | 35 | B0030-C0051-B0030-C0079-B1006-R0051-B0030-C0062-B1006 | RBS-cI-RBS-lasR-T-Plambda-RBS-luxR-T | pSB1AK3 | Mux - Selector |
| - | 36 | B0030-C0061-B0030-C0078-B1006-R0079 | RBS-luxI-RBS-lasI-T-Plas | pSB1A2 | Demux - Input |
- Red-highlighted parts (11, 21, 29, 33) contain I15010 (cph8): according to IGEM DNA Repositories Quality Control (and according to our results) the sequence is inconsistent and so these parts cannot be assembled.
- Green-coloured parts have been succesfully sequenced.
- 24, 25, 34, 35, 36 are part of our final Mux or Demux systems.
- Parts in gray have not been assembled yet (updated: 07-29-2008).
