Team:Warsaw

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<h1>A novel system for generation and screening for new interactors targeted against any bait</h1>
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<li>maximization of interaction between given bait and randomly generated protein by mutating sequence of the latter</li><li>
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interactor presentation on bacterial surface</li><li>
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selection of best bait interactor</li>
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<h3>Institutions whom we would like to thank for financial and technical support:</h3>
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    <td align="center" valign="bottom"><a href="http://www.uw.edu.pl/en/"><img src="https://static.igem.org/mediawiki/2008/6/67/Uw.gif" width="100" height="99" border="0" /></a>
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    <a href="http://www.uw.edu.pl/en/"><h4>University of Warsaw</h4> </a></td>
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<a href="http://www.biol.uw.edu.pl/_2008eng/"><img src="https://static.igem.org/mediawiki/2008/f/f3/Faculty-of-Biology.gif" width="57" height="75" border="0" /></a>
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    <a href="http://www.biol.uw.edu.pl/_2008eng/"><h4>Faculty of Biology, University of Warsaw </h4></a>     
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    <td align="center" valign="bottom"><a href="http://www.fundacjauv.org.pl/"><img src="https://static.igem.org/mediawiki/2008/4/4d/Fundacja_uv-1.gif" width="160" height="65" border="0" /></a>
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    <a href="http://www.fundacjauv.org.pl/"><h4>The Universitatis Varsoviensis Foundation </h4></a></td>
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    <td align="center" valign="bottom"><a href="http://www.fnp.org.pl/ang/index.html"><img src="https://static.igem.org/mediawiki/2008/c/c9/LogoFNP1wers.gif" width="221" height="75" border="0" /></a>
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    <a href="http://www.fnp.org.pl/ang/index.html"><h4>Foundation for Polish Science </h4></a></td>
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    <td align="center" valign="bottom"><a href="http://oligo.pl/English/"><img src="https://static.igem.org/mediawiki/2008/8/8e/Oligo.gif" width="183" height="64" border="0" /></a>    </td>
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<a href="http://www.fuw.pl"><h4>Warsaw University Foundation</h4></a>
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<a href="http://www.iimcb.gov.pl/zylicz_lab.php"><h4>Department of Molecular Biology, International Institute of Molecular and Cell Biology</h4></a>
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<p>Units belonging to the <a href="http://www.biol.uw.edu.pl/_2008eng/">Faculty of Biology, University of Warsaw</a>, who kindly provided access to laboratory space and equipment:</p>
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    <td align="center" valign="bottom"><a href="http://www.biol.uw.edu.pl/_2008eng/index_2501.php?a_2501=541&amp;b_2501=5"><h4>Department of Plant Molecular Biology </h4></a></td>
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    <td align="center" valign="bottom"><a href="http://www.biol.uw.edu.pl/_2008eng/index_2501.php?a_2501=526&amp;b_2501=5"><h4>Department of Virology</h4> </a> </td>
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  <td valign="top" background="https://static.igem.org/mediawiki/2008/9/90/Igrm_notebook_r2_c1.jpg" class="home">First we want to note that our initial plans was very different from what we actually managed to do. Our plans were really amazing: we wanted to create system of biological machines which would allow to investigate protein interactions and simultaneously change sequence of one of them in order to achieve the strongest possible interaction. To make it work we planned to put the DNA sequence of tested protein on low-copy plasmid and transform it to bacterial strain in which it would be mutated (lets call the strain ‘one-armed bandit’). Parts present on this plasmid would cause the protein to be attached to outer bacterial membrane, where the selection would occur. We planned that such selection system would allow us to search for antibodies with new specificities or screen protein libraries. </td>
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<a href="http://www.biol.uw.edu.pl/_2008eng/index_2501.php?a_2501=529&amp;b_2501=5"><h4>Department of Bacterial Genetics </h4></a>
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<td align="center" valign="bottom"><a href="http://www.biol.uw.edu.pl/_2008eng/index_2501.php?a_2501=534&amp;b_2501=5"><h4>Institute of Genetics and Biotechnology</h4></a></td>
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Latest revision as of 21:27, 29 October 2008

Gallery Bricks Notebook Team Project Home

A novel system for generation and screening for new interactors targeted against any bait

  • maximization of interaction between given bait and randomly generated protein by mutating sequence of the latter
  • interactor presentation on bacterial surface
  • selection of best bait interactor

Institutions whom we would like to thank for financial and technical support:

University of Warsaw

Faculty of Biology, University of Warsaw

The Universitatis Varsoviensis Foundation

Foundation for Polish Science

Warsaw University Foundation

Department of Molecular Biology, International Institute of Molecular and Cell Biology

Units belonging to the Faculty of Biology, University of Warsaw, who kindly provided access to laboratory space and equipment:

Department of Plant Molecular Biology

Department of Virology

Department of Bacterial Genetics

Institute of Genetics and Biotechnology

Retrieved from "http://2008.igem.org/Team:Warsaw"