Team:Warsaw/Calendar-Main/23 July 2008

From 2008.igem.org

(Difference between revisions)
Line 3: Line 3:
 +
<html>
 +
<h3>Cloning of omega_A DNA fragment to pACYC177+OmpA_alpha</h3>
 +
<ol><li>DNA fragment of omega_A isolated from gel on 12 July <a href=https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#digest>digestion</a> with SacI and NotI.</li>
 +
<li><a href=https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#digest>clean-up</a>Clean-up of digested DNA fragment.</li>
 +
<li><a href=https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#digest>Digestion</a> (SacI and NotI) and dephosphorylation (CIAP) of pACYC177+OmpA_alpha. </li>
 +
<li>Gel electrophoresis and <a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#DNA_isolation_from_agarose_gel">gel-out</a> of 4300 bp band. </li>
 +
<li><a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#ligation">Ligation</a> of DNA fragments from 2. and 4. (1 hr)</li>
 +
<li><a href="https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#chemotransform">Transformation</a> of E. coli <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">TOP10</a> strain with ligation.</li>
 +
<li>Transformants plating on LB + kanamycin.</li></ol>
 +
</p>
-
<p>'''Cloning of omega_A DNA fragment to pACYC177+OmpA_alpha''' <br>
 
-
1. DNA fragment of omega_A isolated from gel on 12 July digested with SacI and NotI. <br>
 
-
2. Clean-up of digested DNA fragment. <br>
 
-
3. Digest (SacI and NotI) and dephosphorylation (CIAP) of pACYC177+OmpA_alpha. <br>
 
-
4. Gel electrophoresis and gel-out of 4300 bp band. <br>
 
-
5. Ligation of DNA fragments from 2. and 4. (1 hr)<br>
 
-
6. Transformation of E. coli TOP10 strain with ligation. <br>
 
-
7. Transformants plating on LB + kanamycin.
 
-
</p>
 
-
<html>
 
<h3>Cloning of protein Z DNA to pET15b-OmpA-omega in place of OmpA<br>
<h3>Cloning of protein Z DNA to pET15b-OmpA-omega in place of OmpA<br>
Paweł</h3>
Paweł</h3>
Line 19: Line 19:
<li><a href=https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#plasmid_DNA_isolation>Isolation</a> of plasmids from cultures inocluated on previous day</li>
<li><a href=https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#plasmid_DNA_isolation>Isolation</a> of plasmids from cultures inocluated on previous day</li>
<li>Control <a href=https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#digest>digest</a> of isolated plasmids with NdeI and NotI. Two positives obtained (proper band: ~150 bp visible)</li>
<li>Control <a href=https://2008.igem.org/wiki/index.php?title=Wiki/Team:Warsaw/protocols#digest>digest</a> of isolated plasmids with NdeI and NotI. Two positives obtained (proper band: ~150 bp visible)</li>
-
<li>One of positive plasmids transformed into TOP10 and plated on LB+amp, overnight, for further isolation of pET15b+Z+omega vector</li>
+
<li>One of positive plasmids transformed into <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">TOP10</a> and plated on LB+amp, overnight, for further isolation of pET15b+Z+omega vector</li>
</ol></p>
</ol></p>
-
<html>
 
-
<h4>Antoni:</h4>
 
 +
<h3>Antoni</h3>
<p>
<p>
-
1. Setup of overnight culture <i>E. coli</i> <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top">TOP10</a> (LB broth) for preparation of chemocompetent bacteria.
+
<ol><li>Setup of overnight culture <i>E. coli</i> <a href="https://2008.igem.org/Wiki/Team:Warsaw/igem_notebook.htm#top10">TOP10</a> (LB broth) for preparation of chemocompetent bacteria.</li></ol>
</p>
</p>
</html>
</html>

Revision as of 17:29, 5 October 2008

Gallery Bricks Notebook Team Project Home


Previous day
return to main notebook page
Previous entry
next notebook entry

 



Cloning of omega_A DNA fragment to pACYC177+OmpA_alpha

  1. DNA fragment of omega_A isolated from gel on 12 July digestion with SacI and NotI.
  2. clean-upClean-up of digested DNA fragment.
  3. Digestion (SacI and NotI) and dephosphorylation (CIAP) of pACYC177+OmpA_alpha.
  4. Gel electrophoresis and gel-out of 4300 bp band.
  5. Ligation of DNA fragments from 2. and 4. (1 hr)
  6. Transformation of E. coli TOP10 strain with ligation.
  7. Transformants plating on LB + kanamycin.

Cloning of protein Z DNA to pET15b-OmpA-omega in place of OmpA
Paweł

  1. Isolation of plasmids from cultures inocluated on previous day
  2. Control digest of isolated plasmids with NdeI and NotI. Two positives obtained (proper band: ~150 bp visible)
  3. One of positive plasmids transformed into TOP10 and plated on LB+amp, overnight, for further isolation of pET15b+Z+omega vector

Antoni

  1. Setup of overnight culture E. coli TOP10 (LB broth) for preparation of chemocompetent bacteria.